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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… a team has comprehensively described host-virus dynamics in a microbial mat. The Science In microbial mats, … Cone Pool in Mono County, California, scientists have used sequencing methods for the first time to comprehensively … sample — a small proportion of the sample’s billions of bacterial and archaeal cells — and detected the virus in 34 …
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Boosting Small Molecule Production in Super “Soup”
Do metabolic pathways from engineered yeasts still work in cell-free environments? … senior authors. “But this has been done most commonly in bacterial-based systems, and so one of the things that I … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
For the first time in several years, the DOE Joint Genome Institute hosted … mentor Bryce Foster, Benchmarking Bioinformatics Tools for Sequence Similarity Searching Morgan Lavenstein Bendall and … And we’ve been working on isolating and cultivating and sequencing extremophile protists from a hypersaline alkaline …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal … the microbes into small pools of cells that were then sequenced separately. From these samples, 111 … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay Paropkari, Vicente Ramirez and Rhondene Wint had summer 2018 internships in Walnut Creek. The students’ research …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many sequenced by the JGI — so …
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A One-Stop Shop for Analyzing Algal Genomes
The PhycoCosm data portal allows anyone to freely investigate the genes of more than 100 algae. The Science … algal genomes can be incredibly complex and difficult to sequence and understand. A team of researchers led by Algal … inquiry: it shows a full phylogenetic tree of more than 100 sequenced algal genomes — many sequenced by the JGI — so …
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JGI@25: The Human Genome Project, or the JGI’s Origin Story
In honor of the JGI's 25th anniversary in 2022, we have … conditions. While scientists around the world were busy sequencing the human genome, an arms race was being waged. … Genome Institute. Hear her memories of what it was like sequencing around the clock and see some of the physical …
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A Plant Root Atlas for Tracking Developmental Trajectories
A collaborative team led by Geoffrey Schiebinger at the University of British Columbia, Philip Benfey … University and Uwe Ohler at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science The Arctic microalga Plocamiomonas psychrophila can thrive in changing conditions. A recent study shows that when … This was facilitated in part by RNA library preparation and sequencing from the U.S. Department of Energy (DOE) Joint …
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The JGI Data Portal: Improving User Experience
… human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI Data Portal , a pilot download experience … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting … the researchers will receive a FedEx package with the sequenced, quality controlled population representing the … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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