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JGI@25: Using Team Science to Build Communities Around Data
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … a 2012 Community Science Program proposal. Joseph Spatafora of Oregon State University led the effort to sequence … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Simon Roux
… the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of community-building efforts in the field of viral ecogenomics. For this role, Dr. …
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Computationally Classifying Fungal Lifestyles
… were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … known to infect most major food crops and feedstocks for biomass and biofuel production. Learning about the … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Finding the Fermenters
… researchers built an interactive and comprehensive database of fermentative prokaryotes. The Science Most organisms use … the range of bacteria and archaea that rely on this form of metabolism, researchers recently compiled a list of … at the University of California, Davis and UC Santa Barbara generated a list of prokaryotes with fermentative metabolism …
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Predicting the chemical space of fungal polyketides by phylogeny-based bioinformatics analysis of polyketide synthase-nonribosomal peptide synthetase and its modification enzymes
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Baltic Sea coastal sediment-bound eukaryotes have increased year-round activities under predicted climate change related warming
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Scaling High‐Resolution Soil Organic Matter Composition to Improve Predictions of Potential Soil Respiration Across the Continental United States
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Four Researchers Join JGI User Executive Committee
… have been elected to the User Executive Committee of the Joint Genome Institute, a Department of Energy user … State University, Jonathan Eisen of the University of California, Davis, and Michael Köpke of Lanzatech are the latest … to the development of bio-based products and next-generation technologies, and toward a secure energy …
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Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation
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Mining Metagenomes for Cas Proteins
… Institute.  The Science Researchers report the discovery of miniature Clustered Regularly Interspaced Short … led by Jennifer Doudna’s group at the University of California (UC), Berkeley, which is also affiliated with … The ability to accurately edit genomes (that is, repair gene mutations, and either delete or add genes in a precise …
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Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern
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The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa
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