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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome … Sonia Vargas and mentors Tomas Tyml and Frederik Schulz, Eukaryotes in Extreme Environments Theo Loreaux and mentors … huge amounts of data. I was excited to work on fungal genomics and the fact that I got to do a project involving …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … to enable great science that will help solve energy and environmental challenges. Maximizing soybean yield is … ( Glycine max ) also has the advantage of reducing the need for nitrogen fertilizer. These impressive environmental and …
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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal … biofuel production. Efforts such as the 1000 Fungal Genomics Project led by the DOE Joint Genome Institute … to generate a huge pool of mutants, each containing only a single copy of a given gene rather than the two that are …
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New and Improved: Eucalyptus Reference is Now Accessible
… An improved genome assembly to support targeted tree breeding for the bioeconomy.   The Science Researchers report a new … with GENESPACE, a computational tool for comparative genomics.   With a more robust reference genome, researchers … The work (proposal: 10.46936/10.25585/60008105, WIP proposal ID: 508017, …
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Gene Expression: From On-Off Switch to Dial
… Fine-tuning metabolic gene expression helps identify variants in yeast … approach to expression, scientists can now opt for various shades of grey. The ability to fine-tune the … the production of betaxanthins. They used combinations of single guide RNA, or a single RNA piece that recognizes a …
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JGI Part of Berkeley Lab Team Awarded Best Use of HPC in Life Sciences
… This is excerpted from the full announcement “ Berkeley Lab Receives Multiple 2021 HPCwire … the Energy Sciences Network (ESnet) have been recognized for outstanding achievements in science, technology, and … assembler that supports “an unprecedented assembly of environmental microbiomes.” JGI’s Chief Informatics Officer  …
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High-resolution phylogenetic microbial community profiling
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly
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Richard Fox
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Introducing New Members of the JGI User Executive Committee
… new members to the JGI User Executive Committee (UEC) : Roland Hatzenpichler of Montana State University, Teresa … He also wants to assist JGI in extending its activity-based cell sorting pipelines to further the link between cellular … review procedures and the organization of the JGI Annual Genomics of Energy & Meeting. Any investigator who has been …
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JGI User Executive Committee Expands
… Six new members have been elected to the User Executive Committee (UEC) … genetics expertise and experience as a primarily fungal genomics user, he aims to help align JGI policies with … Her research focus is genetically engineering the plant cell wall to address dairy sustainability challenges. She’s …
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