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From Intern to Published Scientist: The Journey of a JGI-UC Merced Intern
… all else, determination. Rhondene Wint, an alumna of the DOE Joint Genome Institute (JGI)-UC Merced internship program and current PhD student, … and it feels so rewarding,” Wint said. For Axel Visel, JGI Science Deputy and a co-founder of the internship program, …
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Dan Rokhsar
Dr. Rokhsar joined the DOE Joint Genome Institute in 2000 as the founding … over fifty plant and animal genomes. He currently leads the JGI’s Computational Genomics group, and is past lead of the …
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The Expanding Universe of Methane Metabolisms in Archaea
… database maintained by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, for publicly available metagenome …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful …
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Triggering Morel Fruiting
… led by Hao Tan from the Sichuan Academy of Agricultural Sciences in China and involving Francis Martin from the … and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility,  reported on …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the world. Most of those researchers send their samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Olpidium, The Key to the Origin of Terrestrial Fungi
… and Igor Grigoriev from the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility, found that the fungus Olpidium is a …
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Micro-Scale Applications Group
… the genetic makeup of natural microbial communities using a variety of cutting-edge approaches.  Our group also … information with individual cells. Research Team    … The JGI uniquely offers the first quantitative Stable Isotope … such as, “who is eating what?” and “who is active? … The JGI provides users access to cutting-edge cell sorting, DNA …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace Cole, Mo Kaze, Akshay … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of …
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials … Berkeley lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the … on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling …
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … genomics analysis to peta-bases, and enabling data-driven science. This is a group of computational biologists, … GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … PhD Cell Biology. Duke …
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