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Secreted Effector Proteins of the Poplar Leaf Spot and Stem Canker Pathogen Sphaerulina musiva Manipulate Plant Immunity and Contribute to Virulence in Diverse Ways.
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High-Quality Draft Nuclear and Mitochondrial Genome Sequence of Fusarium oxysporum f. sp. albedinis strain 9, the Causal Agent of Bayoud Disease on Date Palm.
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
… manage the growth, yield and climate resilience of algae — for potential use as biomass or in biomass conversion to … thrives in the Arctic, and how different types of microbes form communities. As temperatures fluctuate, salt levels … annotated algal genome is available on the JGI’s PhycoCosm data portal.) This research not only sheds light on the …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based … by our new switchgrass manuscript , we plan to use existing data as well as generating additional genomic resources to …
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2022 Progress Report
Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
… a chemical and biological engineer at the University of California Santa Barbara. So plants don’t break down without a … results showed that these fungi may be able to provide tools beyond biomass breakdown, extending into biochemical … — is  building on this work to explore an enzymatic ‘toolbox’ of biomass-degrading capabilities for anaerobic …
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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a model for studying lipid production in other algae that may be … JGI’s early sequencing of C. reinhardtii became available, data mined by the JGI shows that those sequences have been …
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Gut Fungi: Unexpected Source of Novel Chemicals
… — an energetically expensive feat thought to be too costly for them. The Science Anaerobic fungi, which die in the … the genomes of four anaerobic fungal species has revealed, for the first time, that this group is unexpectedly … natural products, O’Malley and her team plan to use genetic tools to boost production and isolate the compounds. …
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JGI on the 2021 Highly Cited Researchers List
JGI! They are among those recognized by Clarivate Analytics for demonstrating “significant influence in their chosen … multi-institutional research team that combined field data with a reference switchgrass genome to associate … colleagues used an extensive JGI database to investigate viruses detected in the samples. Simon Roux co-organized the …
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JGI@25: Mapping Switchgrass Traits with Common Gardens
… which could then be converted into sustainable biofuels . For its importance to the DOE mission, switchgrass is among … at the University of Texas at Austin produced a high-quality reference sequence of the complex switchgrass … switchgrass genome sequence is available on the JGI plant data portal Phytozome. The combination of field data and …
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Biotech Partners Summer Intern Co-Authors NAR Paper
Research publication. The paper describes the version 6 data updates and feature enhancements to the Genomes OnLine … exercise helped us in filling or updating geographic information for nearly 1,100 samples,” said Reddy. Kaushal also reviewed …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. … giant filamentous bacterium, along with its life cycle. For most bacteria, their DNA floats freely within the … has a membrane,” Volland said. “And this is very unexpected for a bacterium.” Strange Encounters in the Mangroves The …
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