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IMG/VR
… JGI's Simon Roux describes the structure and content of the IMG/VR v3 database (img.jgi.doe.gov/vr), the latest … leverage novel capabilities of IMG/VR to browse and search through the more than 2 million viral sequences available in …
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Toward More Efficient Artificial Photosynthesis
… Chloroplast mimic a platform to capture and utilize carbon in a … (MPI) for Terrestrial Microbiology and the University of Bordeaux have developed a platform that mimics … dioxide in the atmosphere. The work was enabled in part through the Community Science Program (CSP) of the U.S. …
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JGI Accepts 17 Proposals for Community Science Program
… Monitoring Inter-Organism Interactions Within Ecosystems Latest portfolio of approved proposals highlight biodiversity and how … to stresses. A total of 17 proposals have been approved through the annual Community Science Program (CSP) call of …
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Cataloging the Microbes that Manage the Health of River Systems
… Database provides details on river microbes in 90% of US continental watersheds. The Science In a recent Nature … of these systems, these communities remain understudied. Through the JGI’s Community Science Program, Colorado State … This work was partially supported by awards from US Department of …
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JGI Earth Month: Healthy Streams, Nutritious Microbes?
… In April 2020, we mark both the 50th celebration of Earth Day on April 22, and DNA Day on April 25. As both … our agricultural systems could become more sustainable through applications of microbiome science; our water … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Len Pennacchio
… In 2003, Dr. Pennacchio joined the DOE Joint Genome Institute and has focused on applying state-of-the-art molecular methods to address wide-ranging … and mouse triglyceride metabolism. He is funded by DOE and through continued competitive grant support from NIH. …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, … viruses — to support scientists around the world. Most of those researchers send their samples in from afar, … much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are …
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Partnering with CalTeach – Training the Next Generation STEM Workforce
… As set out in the JGI Five-Year Strategic Plan – “Beyond … Vision for Integrative and  Collaborative Genome Science” – through early introduction to the resources and disciplines … to further develop a more diverse and inclusive pool of talent for career opportunities at JGI and Berkeley Lab. …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … collaborated with the JGI on a proposal using this approach through the Emerging Technologies Opportunity Program … collected. The team noticed some of the genomes diverged evolutionarily from other previously discovered genomes. …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … translating genomic information into biological function. Through our CSP Functional Genomics call , we look for …
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JGI announces final round of 2022 Functional Genomics awardees
… Twice each year, the JGI accepts proposals for state-of-the-art functional genomics research from potential users … translating genomic information into biological function. Through our CSP Functional Genomics call , we look for …
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Supercharging SIP in the Fungal Hyphosphere
… High-throughput stable isotope probing helps ID novel … The Science Researchers have successfully automated aspects of a commonly-used process for studying microbial … . Summary Arbuscular mycorrhizal fungi, the most widespread type of mycorrhizal fungi, live within a plant’s root …
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