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Northern peatland microbial communities exhibit resistance to warming and acquire electron acceptors from soil organic matter
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Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations
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Amplicon sequencing of ice and water phytoplankton and bacterial communities during an extreme winter in a central Canadian great lake
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JGI-KBase Panel at SACNAS
… through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices for anyone to get credit for their contributions to science. A panel of DOE researchers, program managers, and …
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Extracting the Secrets of Secondary Metabolites
… helps further demystify biosynthetic gene clusters.  The Science Microbial secondary metabolites, those molecules not … of interest. Using CRAGE to domesticate target microbes, users of the U.S. Department of Energy (DOE) Joint Genome … into other bacteria, thereby enhancing the scientific community’s understanding of how secondary metabolites are …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
… leads the Viral Genomics group within the JGI Metagenome Program, and coordinates the development of the virus and … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful … year in Berkeley, Calif. Convening the “viral ecogenomics” community, the VEGA symposium provides networking …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… MycoCosm — a platform widely used across the research community — the work lowers technical barriers for … (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility at Berkeley Lab, addressed this gap in a … genome assemblies in the National Center for Biotechnology Information's GenBank. This led to identifying 6,467 of …
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A Pinch of Salt Activates Silent Gene Clusters in Streptomyces
… This single environmental trigger highlights efficiency for users requiring multiple omics methods to examine microbial chemical production. The Science Soil bacteria in the genus Streptomyces are nature's … support the DOE’s Biological and Environmental Research program’s efforts in advancing genome-based biotechnology. …
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Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes
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Position-Specific Metabolic Probing and Metagenomics of Microbial Communities Reveal Conserved Central Carbon Metabolic Network Activities at High Temperatures
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Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring
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Integration of Metagenomic and Stable Carbon Isotope Evidence Reveals the Extent and Mechanisms of Carbon Dioxide Fixation in High-Temperature Microbial Communities
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