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Outreach Stories
… Interested in reading more JGI intern and mentor success stories? Read more below. …
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All Events
… The JGI is represented at conferences year round; find out where … researchers will be presenting next. Learn about upcoming user-focused webinars and workshops we're hosting. …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome … to identify virus sequences, the design of new experimental approaches to link viruses to their host(s), collaboration with JGI users for analyzing viral datasets, and the organization of …
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Extracting the Secrets of Secondary Metabolites
… for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which … of interest. Using CRAGE to domesticate target microbes, users of the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
… of infecting different host species? Or, do they tend to specialize, infecting just a single host? Another wrinkle … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National … of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported under Contract No. …
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A Complex Confection Decoded: Sugarcane Reference Genome
… reference quality genome and now crop researchers can work toward advancing sugarcane biotechnology. The Science … The Impact In providing a reference sugarcane  genome , the JGI provides foundational genetic information that crop … (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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JGI-KBase Panel at SACNAS
… for Scientific Contributions of Any Size What is considered to be a scientific contribution? This session will … through the Department of Energy-funded National Labs, User Facilities and Programs, and introduce best practices … to get credit for their scientific contributions through data citations, authorship, and presenter opportunities. …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of those … without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome … and bioinformatics annotation pipelines that support JGI’s portals, tools, and the DOE’s emerging AI-enabled capabilities for … 566–569 (2018). Sneddon, MW, Pontius, W, and Emonet, T. Stochastic coordination of multiple actuators reduces latency …
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Iron-rich Microbial Mats’ Main Players: Marsarchaeota
… Novel archaeal lineage found in Yellowstone may have been important in early Earth conditions. The Science Through a combination of sequencing tools and techniques applied to samples collected from … into the evolution of life on Earth. For decades, longtime JGI collaborator Bill Inskeep of Montana State University …
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Streamlining Regulon Identification in Bacteria
… technology could speed up associating transcription factors with their target genes. The Science Regulons are a … coelicolor . The Impact As an integrative genome science user facility, connecting genes to functions is part of the … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at …
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A Collaboration to Improve Plant Genome Annotations Across Species
… To provide broad plant genomic capabilities, the DOE Joint … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … of Energy (DOE) Joint Genome Institute (JGI)*, a national user facility located at Lawrence Berkeley National …
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