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JGI@25: From Life at the Extremes to Editing Genomes
… other enzymes in the CRISPR-Cas system. For the past few years they have partnered with JGI’s Microbiome Data Science … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V CRISPR-Cas Systems Mol Cell. 2020 Aug 6;79(3):416-424.e5. doi: 10.1016/j.molcel.2020.06.022. Wright …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, fungi, viruses — to support scientists around the world. Most of …
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DOE Metrics
FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual … Goal (hours)** Actual Total Actual % Goal FY 2025 Total 700.0     8,585     Q1 2025 175 190.304 109% 2,164 2,136 … metagenomic, or plant genomes. [Download PDF] End-of-year Goal – Develop one new computationally enabled approach …
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JGI announces 2023 CSP Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art … Below find a list of the six researchers accepted for 2023. Proposals are accepted year-round; the next deadline is Jan. 29, 2024.  …
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Work With the JGI! Tips for a Winning CSP Proposal
The JGI’s Community Science Program gives researchers access to all kinds of sequencing, ‘omics and … related to energy and the environment several times a year. A few proposal calls have deadlines coming up – in …
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JGI announces final round of 2022 Functional Genomics awardees
Twice each year, the JGI accepts proposals for state-of-the-art … Below find a list of the final six researchers accepted for 2022. Proposals are accepted year-round; the next deadline is July 31. You can learn more …
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2021 JGI Proposal Call Brings New Investigators into Community Science Program
… interests in algae and secondary metabolites. A total of 27 proposals have been  approved through the annual  … who work with more than 10,000 undergraduate students each year. Brian Looney of Duke University is interested in … three groups: cyanophages, bacteriophages, and giant algal viruses.  The approved proposals started October 1, 2020 and …
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Dealing with Drought: Uncovering Sorghum’s Secrets
Over 40 percent of the cereal crop’s genes respond to drought stress. The Science … Control of Drought Response in Sorghum (EPICON) is a five-year, multi-institution project funded by the DOE Office of … datasets. The results from the first year showed that 10,727 genes or 44% of expressed genes respond to drought …
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Tracking the Origins of Methane-Producing Microbes
Mini-Metagenomics Approach Helps Identify Novel Archaeal Methane … are estimated to produce 500 million tons of methane a year, which is over half the total global methane … three pathways for methanogenesis: hydrogen-dependent and CO2-reducing, or hydrogenotrophic (most common); …
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JGI announces second round of 2023 New Investigator awardees
From left to right: [above] Emma Bell, Mallory Choudoir, Sneha Couvillion, Tobin … a widening circle of researchers. That’s why twice each year we look for novel research projects — aligned with DOE … find a list of the second round of researchers accepted for 2023. Proposals are accepted year-round; the next review …
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JGI announces 2024 Functional Genomics awardees
…   Each year, the JGI accepts proposals for state-of-the-art … applications in support of advancing the bioeconomy.  This year’s project goals range from improving crop productivity … Below find a list of the nine researchers accepted for 2024. Proposals are accepted year-round; the next deadline …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth (Toby) Kellogg and other researchers at the … of plants have resulted in a paper published October 5, 2020 , in Nature Biotechnology . Kellogg and her colleagues, …
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