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Genomic analysis of 94 SEMIA strains isolated from common bean nodules: species diversity and genes related to nodulation, nitrogen fixation, and tryptophan metabolism
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Expanding Virophage Diversity
… in  Microbiome , researchers from the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science facility, have increased the number of … total virophage partial sequences, including over 28,000 unique MCP sequences.  Further analysis led to the …
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JGI Hosts GPU Hackathon in May
… Computing Facility (OLCF), NVIDIA, and the Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science user facility, aims to explore … data are diverse and porting these codes to GPUs present unique challenges for the community. JGI is partnering with …
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2025 NeLLi Symposium
…   Hosted by the DOE Joint Genome Institute, the University of Nevada, Las Vegas, and the Desert Research Institute, the … 2025 NeLLi Symposium delves into the most recent expansions of the Tree of Life and latest discoveries toward the … together to develop recommendations for cultivating new bacteria and archaea revealed by a recent genome census . A …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University of Queensland in 1986, the van Niel Prize recognizes contribution of scholarship in the field of microbiology and is awarded …
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The genome of Polaromonas naphthalenivorans strain CJ2, isolated from coal tar‐contaminated sediment, reveals physiological and metabolic versatility and evolution through extensive horizontal gene transfer
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Calculating the Costs of Multiple Switchgrass Gene Copies
… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for … patterns. In the process, we also hoped to use this unique opportunity to quantify how transitions to higher … Overall, these results indicate that the 8X represent a unique combination of genetic variation that has allowed the …
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JGI Announces 2026 New Investigator Portfolio
… Kumar Gautam, Gareth Gillard, Audrey Goeckner, Jennifer Goff, Sarah Gonzalez Henao, Yang Hai, Julia G. Harenčár, … accepted proposals.  The New Investigator call , part of our  Community Science Program , allows us to work and … and genome assembly to investigate microbial and plant metabolism across diverse ecosystems — from Antarctic soils …
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How Filamentous Fungi Sense Food
… . The Science A team led by researchers at the University of California, Berkeley used a multi-omics approach to … N. crassa is the model organism for filamentous fungi, all of which contain a wide array of plant cell-wall degrading enzymes (PCWDEs) that allow …
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Bacterial Genome Annotation
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A bacterial toolkit for plants
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Silver age of GOLD introduces new features
… sequencing projects carried out at the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley … a broad range of activities from proposal intake to publication. Information is also obtained and cross-checked …
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