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Jeremy Schmutz
… human chromosomes 5, 16, and 19. Following the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement … sequencing of eukaryotic organisms from simple yeasts to large vertebrate genomes.  For the past 13 years, Mr. Schmutz …
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JGI@25 RECAP: 2022 Annual Meeting features historical perspectives on JGI’s 25 years
… As part of the JGI’s 25th anniversary celebration, the 2022 Annual Meeting … no one agency has enough to go for it alone,” he said. A Larger Story; a Hardworking Team Todd Anderson , Director of …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… tiny algae. The cold polar oceans give rise to some of the largest food webs on Earth. And at their base are … like antibiotics, pharmaceuticals, and novel enzymes that function at low temperature.” said Katrin Schmidt, co-lead … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science …
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Jane Grimwood Named HudsonAlpha Genomics Chair
… Biotechnology! Loretta Spencer served as a manyterm mayor of Huntsville, Alabama and is known for her contributions to … she was named a Yellowhammer Woman of Impact.     Notable large-scale multi-institutional JGI projects and resulting publications that Grimwood contributed to include: A 2021 …
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Genome Sequence of the Mesophilic Thermotogales Bacterium Mesotoga prima MesG1.Ag.4.2 Reveals the Largest Thermotogales Genome To Date
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A More Intuitive Phytozome Interface
… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version … on much more maintainable software and hardware infrastructure. Phytozome v13 has been accessible to users since …
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Uncovering Novel Genomes from Earth’s Microbiomes
… Large-scale comparative analysis leads to identification of … and it gives us new insights into microbial diversity and function.” He is already finding ways to utilize the catalog … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science … to these challenges.  DOE’s Office of Science is the largest supporter of basic research in the physical sciences …
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Gotta Catch 'Em Gall
… for new ways to engineer plants. So they’ve looked into wasps that program oak trees to raise their young in structures called galls.  In this episode, hear from Kasey …
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What Happens To a Rainforest When You Dial Up Drought?
… Rainforests store a big fraction of all the carbon on Earth, and soil microbes play a key role in pulling that carbon out of the atmosphere. This episode, researchers take a look at … in a fully enclosed, human-made ecosystem: Biosphere 2.      …
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Mapping the Earth’s Hidden Fungal Kingdom
… roughly half of all genes have completely unknown functions — like a vast library of books written in a … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … to provide the comprehensive, standardized infrastructure that makes such discoveries possible. The JGI's …
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Ancient Algae Reveal Secrets of Plant Evolution
… 600 million years ago. The Science By studying the genes of land plants’ closest algal relative,  Zygnematophyceae , … and multicellularity enabled plants to develop complex structures and adapt to changing environments — ultimately … development of resilient crop varieties able to grow in marginal lands and with minimal resources. Enabling the use …
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JGI@25: The Little Alga That Could
… In honor of the JGI's 25th anniversary in 2022, we have revisited a … sequences have been cited in almost one-fourth (23.8%) of publications focused on that specific algae. The reference … green algal genomes using Chlamy as a reference for functional annotation, including Chromochloris zofingiensis …
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