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Engagement Webinar: What Can You Do With An Approved CSP Functional Genomics Call Proposal?
… DNA Synthesis Science group held a  JGI Engagement: Accessing Functional Genomics Capabilities Webinar inviting researchers to submit white papers to the Community Science Program’s  Functional Genomics call … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Building Sphagnum Genomic Resources
… Sphagnome data would enable researchers’ insights on their potential carbon cycling impact.   The … (CSP), researchers are developing a number of resources to build up Sphagnum as a plant model system focused on … two programs within different Divisions of the Office of Biological and Environmental Research, the Joint Genome …
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Tracking the Origins of Methane-Producing Microbes
… Mini-Metagenomics Approach Helps Identify Novel Archaeal … Methane Metabolism. Methane-producing archaea are estimated to produce 500 million tons of methane a year, which is over … these samples by sorting the microbes into small pools of cells that were then sequenced separately. From these …
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Tracing the Evolution of Shiitake Mushrooms
… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science Shiitake mushrooms get … fungi are part of the genus Lentinula, which have evolved to decompose hardwoods on every continent besides Europe and … decomposers that can break down all of wood’s components — cellulose, hemicellulose, and the toughest molecule, lignin. …
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2022 Progress Report
… Pictured is a timelapse of the Integrative Genomics Building (IGB) seen above is home to the DOE Joint Genome Institute (JGI). Researchers from … Science user facility at Lawrence Berkeley National Laboratory (Berkeley Lab), is to become the leading integrative …
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Doubling Down on Known Protein Families
… Using a novel computational approach, researchers confirm … exploring a dark room with a flashlight, only able to clearly identify what falls within that single beam. When it comes to microbial communities, scientists have historically been … User Facility  located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in support of DOE …
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Extracting the Secrets of Secondary Metabolites
… for growth yet essential for survival, may now be easier to characterize following a proof-of-concept study in which … within a lab environment, shining a light into this “biological dark matter.”  It also offers CRISPR a point of … That work by JGI researchers was published April 2022 in Cell Chemical Biology . When it comes to insect killer P. …
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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… For the first time in several years, the DOE Joint Genome Institute hosted … and determination as they came onsite. From data carpentry to science communications, their schedules were filled with … Sandra Hernandez Gonzalez and mentor Hualan Liu, Building Expression Host in Bacilli Class using CRAGE Technology …
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Sequencing the fungal tree of life
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A new view of the tree of life
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JGI announces 2023 CSP Functional Genomics awardees
… research from potential users who need help translating genomic information into biological function. Through our CSP Functional Genomics …
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An Integrated Dataset to Understand Ecosystem Interaction
… yields a comprehensive tree and soil dataset for understanding the dynamic relationship between poplar trees and their microbial partners. The Science To help better understand how ecosystems work and how … outlined in  Scientific Data connects molecular features to large ecosystem-level processes for the first time. By …
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