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Identifying the Microbial Cleanup Crew at a Superfund Site
… Analysis reveals the microbial community involved in a bioremediation effort. The Science In 1999, … PCE (perchloroethylene) found its way into the groundwater of several communities in New Mexico via leakage from a … down PCE into the chemical compound ethene. Applying genome sequencing and analysis, the researchers identified other …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology … line of research combined with past insights will allow the identification of potentially novel combinations of genetic … More genome copies in switchgrass leads to increased climate flexibility …
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An Enzyme Family that Helped Shape Nitrogen Metabolism on Our Planet
… Researchers looked across many organisms to see that aminotransferase enzymes have evolved mix-and-match … characteristics — creating many different ways of processing nitrogen. To boost crops more efficiently in … together to create the robust network to supply amino acids fast enough for life to grow,” Yoshikuni said. To gain this …
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Examples: Successful LOIs & Submissions
… See below for examples of successful Letters of Intent to our Community Science Program Large-Scale Call, … Linking lignin engineering to drought stress resilience: RNA-seq and … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures …
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Improving the Cacao Genome and Phytozome
… Global chocolate brands can’t exist without cocoa According to the  International Cocoa Organization (ICCO), global … fungal infections. That’s why Mars, Inc., a maker of chocolate for more than 100 years and one of the world’s … by a Mars, Inc.-led consortium through the Cacao Genome Database project. The genome sequence was assembled by the …
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Enlarging Windows into Understanding Gene Functions
… JGI innovates protocol revealing how genetic variations in sequences affect traits. In a text file, the rows of letters A, T, C and G appearing over and over in a … genes are turned on is known as DNA affinity purification sequencing or DAP-seq. The technology was developed by Ronan …
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Site-Selective C–H Halogenation Using Flavin-Dependent Halogenases Identified via Family-Wide Activity Profiling
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Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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Uncovering secondary metabolite evolution and biosynthesis using gene cluster networks and genetic dereplication
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Development of platforms for functional characterization and production of phenazines using a multi-chassis approach via CRAGE
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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