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JGIota: Looking Back at Methane-Making Microbes
… We count on livestock for food and fiber, but raising these animals also produces an atmosphere-warming gas: methane. Those emissions mainly come from gut microbes — the bacteria and archaea …
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JGI@25: From Life at the Extremes to Editing Genomes
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … nature was using it to do something important.” Related Publications:  A scoutRNA Is Required for Some Type V … Combining forces with UC Berkeley to seek elusive gene-editing …
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Simon Roux
… Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the development of novel computational tools to … B.S. in Microbiology, Université Blaise Pascal, France M.S. in Data Analysis and Modeling for Life Sciences, Université …
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JGI@25: Studying Sorghum’s Survival Skills
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … reference genome for Sorghum bicolor . Since then, 2,993 publications, 107 patent applications, and 53 patents have …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements … and environmental challenges. Viruses are everywhere — in soil, the sea and, of course, the cells of other …
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Model Fern Reveals Insight into DNA Thievery in Ferns
… with C. richardii The Science Fern genomes are huge, and incredibly complex — making it difficult to grasp a deeper understanding of fundamental aspects of fern biology and, more … The work conducted by the US Department of Energy Joint Genome Institute is supported by the Office of Science …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and CRAGE technologies. While CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is the leading tool … The work conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Virus Discoveries that Keep Getting Bigger
… Sequence-based studies — from metagenomics to single-cell work — have quickly accelerated understanding of giant viruses. The Science In the last thirty years, in environments all over the … This work was conducted by the US Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Mike Sneddon
… Dr. Sneddon is the Advanced Analysis Group Lead in the Data Science and Informatics Department at the Joint Genome Institute. His team of engineers and scientists … , PCT application PCT/US2021/018050 (published 2021). Arkin, AP, et al. KBase: The United States Department of Energy …
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Promoting the Power of Viral Metagenomics
… An article summarizing the field of viral metagenomics, authored by JGI … Nayfach and  Nikos Kyrpides , was  recently published in the journal  Annual Review of Biomedical Data Science . The following guest piece was written by Call, a postdoctoral fellow … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility …
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Supporting Global Research into Actinomycetes
… ActinoBase offers a public portal of insight into special groups of actinobacteria Streptomyces is more than just a funny word. The … The U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility  located at … ActinoBase Data Portal …
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Training the Next Generation of Talent
… New Graduate Internship Program Builds Bridges Between DOE JGI, UC Merced Days after presenting the results of his summer research at the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science user …
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