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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring polar bears in winter … Computational Sieves to Filter Sequences There are more microbes on the planet than particles in a handful of dirt, … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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Data Ecosystem
To expand access to integrated data, improve tools and infrastructure as well as … cohesive data standards, the JGI partners with a number of facilities.  … Through its partnership with NERSC and the … to facilitate these efforts. Particular areas of emphasis will be the development of tools and …
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Extracting the Secrets of Secondary Metabolites
… for survival, may now be easier to characterize following a proof-of-concept study in which researchers paired CRISPR and … to integrate large genetic payloads directly into diverse microbes. Combining CRAGE with CRISPR provides researchers …
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
Survey of Setaria's natural diversity reveals seed dispersal in wild populations for the first time. For years, Elizabeth … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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Engagement Webinar: Accessing NEON’s Environmental Sample Archives, Applying JGI & EMSL Omics Tools
National Ecological Observatory Network (NEON) is a network of field research sites designed to collect long-term open … data to better understand how U.S. ecosystems are changing.  Through the  “Facilities Integrating Collaborations … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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Antisense Down-Regulation of 4CL Expression Alters Lignification, Tree Growth, and Saccharification Potential of Field-Grown Poplar    
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A Natural Mechanism Can Turbocharge Viral Evolution
Understanding how a fundamental mechanism of evolution allows microbes to adapt to changing environments. The Science The …
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JGI@25: Using Team Science to Build Communities Around Data
In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable achievements that showcase our collaborations and … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …
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Emiley Eloe-Fadrosh
Her current research focuses on leveraging thousands of metagenomic datasets from host-associated and … and characterize genomic information from uncultivated microbes and viruses. Prior to joining the JGI, she was a … Futures … Metagenome Science Program … Education … Selected Publications … Awards and Service …
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Honey Bee Gut Microbiota Divvy Up Dinner
Scientists find bee gut microbes have a division of labor when it comes to metabolizing complex … The authors think the reason may be that polysaccharide-degrading enzymes are secreted. It’s like giving everyone a … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …
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Streamlining Regulon Identification in Bacteria
RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … transcription-sequencing (RIViT-seq) to facilitate the characterization of transcriptional regulation as well as …
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JGI@25: Following Fungi that Pry Apart Plant Polymers
Over the last year, we’ve been revisiting a number of notable achievements that showcase our collaborations and … evolved these really tough cell wall materials that keep microbes — and the enzymes that would be produced by … on this work to explore an enzymatic ‘toolbox’ of biomass-degrading capabilities for anaerobic fungi . Eventually, …
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