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… to aid with genome assembly and transcriptome analysis of microbial, fungal, and plant research projects.  More recently, these long-reads … Note that beyond quantity, input quality (i.e., presence of “intact” high-molecular weight DNA) is an important … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… Highlighting the latest interactive version of the JGI’s plant data portal. On August 6, 2021,  version 12 of Phytozome will be retired, and  version 13 will become … related to clean energy generation and environmental characterization and cleanup. The JGI provides integrated …

… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … this year. And today we have our conversation with Professor Alison Narayan, from the University of Michigan. I hope she’ll accept this description, but I’d …

… A fungus relies on bacteria to regulate key components of its reproductive machinery The Science To better … , is recognized as a mutualist, where both species of organism benefit from association, but was predicted to … endobacteria, the Rhizopus fungus cannot act as a plant pathogen, it cannot reproduce asexually, and …

… A collaborative team led by researchers at the University of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office … could be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped …

… from gut microbes — the bacteria and archaea breaking down plant matter. So since 2010, the JGI has supported …

… . The Science Most species are diploids and have two sets of chromosomes, one from each parent. In contrast, many crops have multiple sets of chromosomes (they are “polyploid”) and their complex … crop that very efficiently converts solar energy into plant biomass, which can then be crushed to extract the …

… the fourth Director in its 27-year history. He has a wealth of managerial experience from almost 20 years in the … focused on the discovery, development and commercialization of novel production organisms and fermentation processes for … on secondary metabolites. He is also on the Leadership Team of the National Microbiome Data Collaborative and served as …

… Describing the largest analysis to date of the modified DNA base 5mC variations in fungi. The … themselves can also be modified. The best-known example of a modified DNA base is a methylation of the base cytosine … than 500 species of fungi. The Impact Interactions between plants and fungi run the gamut from mutually beneficial to …

… efforts to expand the metabolomics capabilities and product offerings for JGI users.  Using cutting-edge mass … techniques, the platform delivers rich metabolite profiles from diverse biological and environmental samples in support of user science.  Capabilities offered by the platform are a …

… New genomes highlight the diversity of white rot fungi in the genus Lentinula   The Science … Shiitake mushrooms get their name from the same place they often source their nutrients — the shii tree, a Japanese … and their evolution could provide strategies for converting plant waste into sugars for  biofuel production. …