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Contrasting Community Assembly Forces Drive Microbial Structural and Potential Functional Responses to Precipitation in an Incipient Soil System
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Supercharging SIP in the Fungal Hyphosphere
… successfully automated aspects of a commonly-used process for studying microbial communities, with results published in the  November 2022 issue of Microbiome . High-throughput stable isotope probing (SIP) … most widespread type of mycorrhizal fungi, live within a plant’s root system. They form mutually beneficial …
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JGI@25: Tracking & Subduing the Plague of California’s Oak Woodlands
… energy and environmental challenges.   Scanning the California oak woodlands from the air, large swaths of the … can be seen. These plagued patches have become kindling for the inevitable next firestorm. The majestic sentinel … ra-MOR-um) the genus in Latin translates to “plant destroyer” and it has served as just that on a …
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based … could be generating these observed patterns. As many other plant species have natural cytotype variation, we also hoped …
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JGI Workshops at PAG
Jan. 12 workshop: The Rapidly Expanding Genomics of Algae   With advances in genomics technologies, … of the wider genomics community. Jan. 13 workshop: BER Plant Genomic Science In this workshop, we will present … hear from researchers who are applying genomic sequence information to BER funded activities of plant systems. We will …
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JGI@25: Building a Better Bean
… in soil health through nitrogen-fixation and holds clues for maximizing soybean, the common bean’s close relative, as … use Phaseolus as a test model quite frequently for R&D in plant genomics, because it is an inbred dicot,” Schmutz explained, …
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Ecosystem Fabrication (EcoFAB) Protocols for The Construction of Laboratory Ecosystems Designed to Study Plant-microbe Interactions
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Fungal ecological strategies reflected in gene transcription ‐ a case study of two litter decomposers
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Toward More Efficient Artificial Photosynthesis
Chloroplast mimic a platform to capture and utilize carbon in a synthetic fixation … (Berkeley Lab). Supporting the Erb lab through the CSP Functional Genomics call, the JGI synthesized library of genes that …
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Functional Genomics of Novel Secondary Metabolites from Diverse Cyanobacteria Using Untargeted Metabolomics
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Susannah Tringe Named 2020 DOE Lawrence Award Recipient
… highest honors! Tringe, a microbiologist, was recognized for “advances in sequence-based studies of microbial … communities in carbon cycling, in interactions with plants, and as drivers of methane production, nutrient … is the interim director of Berkeley Lab’s Environmental Genomics and Systems Biology Division, and JGI’s deputy for …
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Picking Up Threads of Cotton Genomics
… the cotton fields look like popcorn is literally growing on plants, with fluffy white bolls bursting out of the green … , both faculty investigators at the HudsonAlpha Institute for Biotechnology. “The goal has been for all this new … Berkeley National Laboratory, is committed to advancing genomics in support of DOE missions related to clean energy …
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