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A Collaboration to Improve Plant Genome Annotations Across Species
To provide broad plant genomic capabilities, the DOE Joint Genome Institute works in partnership with the … improvement for plants. As part of that partnership, the JGI and HudsonAlpha researchers led a team that  recently … one of which is sweet sorghum Rio from a JGI Community Science Program project and another is Lupinus albus from a …
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Panel Discussion: Launching & Sustaining Startups in Synthetic Biology
The Berkeley Lab Biosciences Area Entrepreneurship Program presents… Eyes on the … (Cyclotron Road company) Hosted by Nigel Mouncey, Director, DOE Joint Genome Institute Read a synthesis from the panel … and environmental characterization and cleanup. The JGI provides integrated high-throughput sequencing and …
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Simon Roux Named 2025 ASM Microbiome Data Prize Awardee
Congratulations to US Department of Energy (DOE) Joint Genome Institute (JGI) staff scientist Simon Roux , who was recently selected … management best practices that have advanced the microbial sciences. The Prize also recognizes innovative and impactful …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
Every year, the JGI sequences around 35,000 samples — from plants, algae, … the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with …
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Access to Rock Star Scientists
Through the JGI-UC Merced Genomics Internship, graduate students Candace … of the internship program. Candace Cole, UC Merced JGI Mentors : Ben Cole & Axel Visel, Genomics of … lab. My favorite thing is the mentorship provided by JGI. Everyone at JGI is so nice and helpful.”     Mo Kaze, …
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Coevolution of the Ess1-CTD axis in polar fungi suggests a role for phase separation in cold tolerance
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Crysten Blaby-Haas
Blaby-Haas joined the JGI in 2022 as lead of the Biomolecular Materials Initiative, a partnership between JGI and the Molecular Foundry, a nanoscale research and … Berkeley lab. She earned her PhD in Microbiology and Cell Science in 2011 from the University of Florida, working with …
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Nikos Kyrpides
Dr. Kyrpides joined the DOE Joint Genome Institute in 2004 to lead the Genome … Kyrpides led the development of the genome analysis and Bioinformatics core at Integrated Genomics Inc. in Chicago, IL. … on Microbiome Research with an emphasis on Microbiome Data Science. His group is developing novel methods for enabling …
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Zhong Wang
… on developing new bioinformatics solutions to support JGI in adopting new genomics technologies, scaling up … genomics analysis to peta-bases, and enabling data-driven science. This is a group of computational biologists, … GPU, Cloud etc) and their applications in solving DOE’s most challenging problems. … PhD Cell Biology. Duke …
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T-Toxin Virulence Genes: Unconnected Dots in a Sea of Repeats
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Hiroshi Otani
Since joining the DOE Joint Genome Institute in 2016, Dr. Otani has been … of new secondary metabolites. Prior to joining the JGI, he studied transcriptional regulation, metabolism and … University of Tokyo … Kunakom S, Otani H, Udwary DW, Doering DT, Mouncey NJ. Cytochromes P450 involved in …
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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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