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Mapping Heat Resistance in Yeasts
… A new approach for improving functional annotation in fungal genomes. The Science In a proof-of-concept study, researchers demonstrated that a new genetic mapping … given species. These approaches don’t allow researchers to compare across very distant species that no longer mate to …
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Streamlining Regulon Identification in Bacteria
… RIViT-seq technology could speed up associating transcription factors with their target genes. The Science Regulons are … transcription in bacteria. Using this technology, which combines an in vitro transcription assay with RNA … given sigma factor are inferred. Prior to this most recent study, only 12 sigma factors and 200 genes (or 209 sigma …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… visible to the naked eye, microscopy reveals unexpected complexity At first glance, the slightly murky waters in the … 5,000 times bigger than most bacteria. To put it into context, it would be like a human encountering another human … at the Université des Antilles and a co-first author on the study, performed the 16S rRNA gene sequencing to identify …
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Adaptations to marine versus terrestrial low temperature environments as revealed by comparative genomic analyses of the genus Psychrobacter
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From bench to biotech: how a CURE cultivates student self-efficacy, gains in scientific thinking, and career aspirations
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2024 Progress Report
… from the DOE Systems Biology Knowledgebase (KBase), the National Microbiome Data Collaborative (NMDC), and Berkeley Lab Biosciences Area are also co-located in the IGB. Vision  Lead genomic innovation for a sustainable bioeconomy. … and professional expertise to support the global research community in studies of complex biological and environmental …
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Pinning Down a Piece of Photosynthesis
… By studying the structure and function of a cyanobacterial protein, researchers have new … has some amazing resources and people — not just the instrumentation — but the experts we were able to work with on … of Science User Facility located at Lawrence Berkeley National Laboratory, is committed to advancing genomics in …
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Graduate Students Get Thesis Research Opportunity at the JGI
… the opportunity to pursue part of their thesis research at one of the DOE national laboratories or national user … caliber of scientists.” For her project, “Microbial Community Structure and Methane Production in California’s … and metabolism, work on which she will expand with her study of microbes in California’s manmade water transport …
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Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations
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Low Mutation Rate and Atypical Mutation Spectrum in Prasinoderma coloniale: Insights From an Early Diverging Green Lineage
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Engagement Webinar: Harnessing JGI’s Metabolomics Capabilities
… Webinar held November 5, 2020 (watch the  video below, captions are available) spotlighted the metabolomic analysis capability available through the  Community Science Program (CSP) . This includes mass … Q: Can you give us an idea about the scale of an average study? How many samples are typically involved? How long …
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From Competition to Cooperation
… Tracking evolution of symbiotic lifestyles across multiple fungal lineages. The Science By comparing 135 fungal sequenced genomes, researchers were … (Berkeley Lab). All of the fungal genomes used in the study are available on the JGI fungal portal  MycoCosm . The …
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