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Researching and Solving Real-World Problems with the 2023 JGI-UC Merced Interns
… and the fact that I got to do a project involving over 12,000 fungal genomes was just really, really exciting for …
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Mining Public Databases Yields Largest Map of Fungal Mitochondrial Genomes to Date
… energy metabolism. The Science Researchers produced nearly 10,000 new annotations of fungal mitochondrial genomes — the … dataset of its kind ever assembled. The team identified 15 core genes shared across all fungi, and found that some … gene models. The JGI workflow consistently recovered all 15 core mitochondrial genes across the dataset, whereas a …
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Metabolic analysis of the soil microbe Dechloromonas aromatica str. RCB: indications of a surprisingly complex life-style and cryptic anaerobic pathways for aromatic degradation
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Tina Clarke
… Partner for the Joint BioEnergy Institute (JBEI) and in 2017 joined the Joint Genome Institute (JGI). Tina serves in … Compensation Analyst and Human Resources Partner, June 2017 –  present Sr. Compensation Analyst, May 2015 –  present Joint Genome Institute (JGI) HR Partner, June …
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High-quality permanent draft genome sequence of Ensifer medicae strain WSM244, a microsymbiont isolated from Medicago polymorpha growing in alkaline soil
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Fine-scale evaluation of two standard 16S rRNA gene amplicon primer pairs for analysis of total prokaryotes and archaeal nitrifiers in differently managed soils
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Work With the JGI! Tips for a Winning CSP Proposal
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Partnering with CalTeach – Training the Next Generation STEM Workforce
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Eelgrass Proves to Be Much Younger Than We Thought
… the southern California and Mexican coastlines. Roughly 100,000 years later, that Japanese eelgrass crossed the … from the China Scholarship Council to L.Y. (number 201704910807), by a fellowship to M.K. in the Helmholtz School for …
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Taking Stock of the Known and Unknown Microbial Space
… to the global research community.  Published January 17, 2025 in Science Advances , researchers at the U.S. … what is still unknown.  “We took a deep dive into over 1.8 million bacterial and archaeal genomes to see how much …
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Mike Sneddon
… library and natural product discovery platform. WO2021163637A1 , PCT application PCT/US2021/018050 (published 2021). …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… Pinpointing the processes happening on and in forest soil also better enriches models of global carbon and … needed to build a detailed database on the denizens in the soil. While large protein databases, like UniProt, exist, are … reference fungal genome sequences assembled as part of its 1000 Fungal Genomes Project . To map microbial activity, …
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