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Busting the Unbreakable Lignin
… to tackle when it comes to breaking down a plant for energy: Cellulose, hemicellulose and lignin, … California at Santa Barbara  recently published a paper in  Nature Microbiology offering irrefutable evidence that … Center. O’Malley is also affiliated with JBEI. The JGI data portals and pipelines helped identify potential genes …
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Dispatches From JGI Interns
… describe their deep dives into genomics, computational tools, and big data.  …
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From Berkeley to Binghamton: Tracking Strawberry Evolution
… also holds a joint appointment with the University of California, Berkeley. Nowadays, Session is an Assistant … in New York. He and Rokhsar have  recently published a Nature Communications paper that builds off their early … arise when different ancestral species crossbreed before genome doubling. In allopolyploids, the set of …
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The Case for Conservation
… is a short plant with a complex genome . Now, high-quality reference genome sequences of the male and female … advances in sequencing technologies applied to the effort. The Impact Found on all continents, including … to the discovery of genes that could be used for multiple biotechnological applications. These applications include …
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Neha Varghese
Neha’s key role is to design, benchmark, and apply bioinformatics software to enable analysis and interpretation of genomic and metagenomic data for JGI’s user community. She also provides support for … through implementation of advanced analysis pipelines and tools as well as development and implementation of …
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Extensive remodeling of a cyanobacterial photosynthetic apparatus in far-red light
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Novel bacterial clade reveals origin of form I Rubisco
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… who has been awarded the van Niel International Prize for Studies in Bacterial Systematics for the triennium 2017-2020! Established by the University … genomics and metagenomics. They cited her “landmark” 2013 Nature paper , which uncovered nearly 30 major previously …
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Trent Northen
… large DOE-funded research programs using mass spectrometry for energy and environmental research, including through the … survey of Populus across genotypes and environments. 2024 Nature Sci Data. 11, 339. https://doi.org/10.1038/s41597-024-03069-7  …
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Climate Change Threatens Base of Polar Oceans’ Bountiful Food Webs
… organisms called phytoplankton (from the Greek phyto for ‘plant’ and planktos for ‘wanderer’). But they vary … according to a new study published September 16, 2021 in Nature Communications , warmer waters and communities … and stark the biogeographic boundary is between them. The data is somewhat beautiful in that regard,” said Andy Allen, …
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Genomic variation within the maize stiff‐stalk heterotic germplasm pool
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A Revamped Amplification Method that Enables Nearly Complete Single-Cell Genomes
… the  genomes of microorganisms is incredibly useful for understanding the microbiome of the earth, but most … shotgun metagenomic sequencing and single-cell sequencing. For years, extracting single cells and then amplifying their … and researchers achieve their analysis goals. Offering this tool establishes the JGI as a leader in single-cell genomic …
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