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Characterizing Communities: JGI Announces Latest CSP Portfolio
… based on 92 letters of intent. Additionally, 40 percent of the proposals were submitted by researchers who had … Nearly 200 Terabases of data are expected to be generated for the accepted proposals, said Susannah Tringe, JGI User … The proposal targets the CSP focus area in plant microbiomes, as well as those in inter-organismal …
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Draft genome and description of Consotaella salsifontis gen. nov. sp. nov., a halophilic, free-living, nitrogen-fixing alphaproteobacterium isolated from an ancient terrestrial saline spring
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
National Laboratory (Berkeley Lab) and the Laboratory for Research in Complex Systems (LRC) in Menlo Park, Calif. … giant filamentous bacterium, along with its life cycle. For most bacteria, their DNA floats freely within the … bacterium was doing in the mangroves. “Mangroves and their microbiomes are important ecosystems for carbon cycling . If …
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Arboriscoccus pini gen. nov., sp. nov., an endophyte from a pine tree of the class Alphaproteobacteria, emended description of Geminicoccus roseus, and proposal of Geminicoccaceae fam. nov.
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Calculating the Costs of Multiple Switchgrass Gene Copies
… of Texas (UT) at Austin, the HudsonAlpha Institute for Biotechnology (HudsonAlpha), and the U.S. Department of … questions they asked – and answered – in the study that recently appeared in the Proceedings of the National Academy … natural sampling and field experiments due to its potential for habitat restoration and as a feedstock for biomass-based …
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Better Genome Editing for Bioenergy
… tool that can help scientists engineer organisms for bioenergy applications. Cas9 needs guide RNA to lead it … a set of guide RNAs that were effective against 94 percent of the genes in a lipid-prolific yeast. The Impact The … renewable fuel. In fact, lipids can make up more than 90 percent of the microbe’s dry weight. In order to better harness …
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JGI@25: The Little Alga That Could
… to those who study it) a powerful reference organism for studying photosynthesis and cell motility. It’s also a model for studying lipid production in other algae that may be … including work with Olivier Vallon of the French National Centre for Scientific Research on the Chlamy pan-genome and …
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A Collaboration to Improve Plant Genome Annotations Across Species
… works in partnership with the HudsonAlpha Institute for Biotechnology, which specializes in genome improvement … the JGI and HudsonAlpha researchers led a team that  recently published work on the JGI Plant Gene Atlas in  … 12 plants, which are JGI Flagship Plants, mostly related to biofuels and feedstocks. And then we expanded that to …
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The JGI Data Portal: Improving User Experience
The human-centered, agile collaboration between the JGI and the information technology company Truss has resulted in the JGI … team started small, in the tradition of agile design and development,” said Linda Setchell, a Truss product manager …
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High-quality PacBio draft genome sequences of 17 free-living Bradyrhizobium and four related Nitrobacteraceae strains isolated from arid soils in the Santa Catalina Mountains of Southern Arizona
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Mediterranean grassland soil C–N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms
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Jeremy Schmutz
Genome Institute dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute for Biotechnology. … et al. 2017. Sparse panicle1 is required for inflorescence development in Setaria viridis and maize. Nature Plants …
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