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Improved-high-quality draft genome sequence of Rhodococcus sp. JG-3, a eurypsychrophilic Actinobacteria from Antarctic Dry Valley permafrost
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Defining a Pan-Genome for Antarctic Archaea
… sequences from six hypersaline lakes, researchers focused on understanding the genomic variation in haloarchaea … applications. The work has been enabled through the JGI Community Science Program (CSP) . Cavicchioli and his … Lake, one of the lakes in the nearby Rauer Islands. Additionally, they compared metagenome data generated from samples …
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Making a Lichen Together
… time, a team analyzes the transcriptomes of a lichen fungus and alga to understand their partnership more clearly. … The humble lichen is a superorganism: one being that is actually comprised of two (or more) participants. One is a … the US Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility. Grigoriev and …
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New Research Sheds Light on Diversity in the Deep Sea
… vents are ocean-floor openings in the Earth’s crust that emit hot, mineral-rich water. These vents are too … these vents survive in very hot, high-pressure and chemically-rich ecosystems. This means they hold clues for … the communities studied. The datasets are available on the JGI’s  Integrated Microbial Genomes & Microbiomes (IMG/M) …
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A Plant Root Atlas for Tracking Developmental Trajectories
… single root cells and combining the information with previously published datasets. The work was  recently published in … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … species for which fewer ‘marker’ genes are known that are hallmarks of different cell types.” His contribution to the …
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Alabama Agricultural & Mechanical University Internship Program
… success of the UC Merced internship program, they left the JGI more confident and ready to tackle real-world scientific issues. Our interns say their experiences allowed them to:  Learn new skills. Experience industry-level work and coding. Receive mentorship, network and …
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Polar Phytoplankton Need Zinc to Cope with the Cold
… in the chilly waters of Antarctica, tiny ocean-dwellers called phytoplankton play an outsize role in cycling carbon … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at Lawrence Berkeley National …
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ALE: a generic assembly likelihood evaluation framework for assessing the accuracy of genome and metagenome assemblies
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Insight into the Bacterial Endophytic Communities of Peach Cultivars Related to Crown Gall Disease Resistance.
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River microbiomes from around the world: Kelly Wrighton
… Kelly Wrighton and her group at Colorado State University in Fort Collins have a massive undertaking: … sequencing the world’s river microbiomes. And they’re using team science to do it.   …
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Complete Genome of Oil-Rich Alga Reveals Ideal Platform for Bioengineering
… targeting transforms oil-producing alga into a powerful platform for developing ​​bio-based industrial products.    The Science Scientists have fully … 2025 issue of The Plant Cell. Auxenochlorella is an allodiploid hybrid of two species, similar to a mule, but …
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Tanja Woyke Awarded van Niel International Prize for Studies in Bacterial Systematics
… 2013 Nature paper , which uncovered nearly 30 major previously uncharted branches of the tree of life. A senior … Lab), Woyke currently serves as the interim deputy for JGI User Programs. Earlier this year, she was elected to the … Genomics Program since 2009 and heads the Single Cells group . Woyke also holds appointments as Adjunct Scientist …
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