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The CSP Functional Genomics call is to enable users to perform state-of-the-art functional genomics research and to help them translate genomic information into biological function.  The emphasis is on projects leveraging …

… “Adopt a Genome” is an informal program for faculty to “claim” the JGI’s unpublished … work with undergraduates in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of …

… uses advanced sequencing technologies to decode the genomes of microbes in their natural environments. This work … diversity and metabolic potential, with implications for energy production, environmental sustainability, and … comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

… (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices … users and their science including technical capabilities offered, proposal review procedures, and the annual user … has been an active user of the JGI at any time in the past two fiscal years is eligible for election to the UEC. Terms …

Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and … platforms, tools and data for deciphering regulatory networks, and refining experimental approaches to explore the … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …

… functional genome annotation, improves understanding of the role small molecules play in diverse biological systems, sheds light on nutrient cycling, and … of new molecules and pathways. The JGI Metabolomics Platform delivers rich metabolite profiles from diverse …

… research is focused on the discovery and characterization of novel bacterial, archaeal and eukaryotic microbes and viruses in environmental sequence data. We use multi-omics (metagenomics, … The ISME Journal. 8 (8), 1634-1644 … Publications … For further details, please reach out to the Group Lead …

… and other omics technologies.  The exponential growth of DNA sequencing data, coupled with recent computational … analysis of thousands of archaeal and bacterial type strains ( GEBA-type strains project ), the delineation of … al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et …

Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including a downloadable pdf of products … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …

Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. … solve energy and environmental challenges.  Commissioned for the JGI’s 25th anniversary, the JGI mural references … the frontiers of environmental and energy genomics. The two-story mural at the Integrative Genomics Building was …

… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  Mission Areas . … is for projects that translate genomic information into biological function. The  New Investigator and Functional …

… works closely with the Berkeley Lab Intellectual Property Office to facilitate these new interactions.  The PDT … high-throughput sequencing and other resources at the JGI for projects of relevance to Department of Energy missions. … feedstock into valuable bioproducts, but many  Clostridium strains are difficult to engineer. Yasuo Yoshikuni and his …