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… sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains. These lakes are isolated, but varied. They’re a great way to see …

… out introns and dealing with, you know, weirdness in the sequence. You know, some clusters are not clustered…   … it so easily with fungi. So…   NANCY: Yeah, I don’t know why. For example, with that – actually there’s a good talk … this and that. They’re doing all this 16S and I said, “Why don’t you just include the ITS too? It’s so easy to add …

… Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … bit about your perspective on that kind of technique and why it’s valuable to you? Kate Duncan: I think both genome …

… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …

… Lake Mendota sits right next to the University of Wisconsin, … Trina McMahon's lab has been sampling the microbes of that lake for over 20 years, to understand how the freshwater … 3 episodes are the story behind that giant assembly from Lake Mendota. In this episode: the software evolution that …

… and nutrient cycling to enhance crop resilience, improve soil health, and make more efficient use of marginal lands …

… collaborations in 2018. The cover is an image of Mono Lake, a saline soda lake east of California’s Yosemite National Park, taken … own Jon Bertsch. Microbes isolated from Mono Lake were sequenced by the JGI (isolates here , here and here ), and …

… to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …

… our series on a giant metagenome assembly from Wisconsin’s Lake Mendota. In the last two episodes, we’ve covered the … this project. But every part of this project depends on lakewater samples — so this episode is a look at how …

… the story of a giant metagenome assembly from Wisconsin’s Lake Mendota. In this episode: a look at the supercomputing …