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Microbiome Data Science Team
… al. (2017) Protein structure determination using metagenome sequence data. Science   355(6322):294-298 Paez-Espino D. et … al. (2015) Microbial species delineation using whole genome sequences. Nucleic Acids Res. 43(14):6761-71 Kyrpides NC et …
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Experimental Evolution of Extreme Resistance to Ionizing Radiation in Escherichia coli after 50 Cycles of Selection.
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Frequently Asked Questions: Project Management
I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …
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Giant Bacteria Found in Guadeloupe Mangroves Challenge Traditional Concepts
… and genomic features of this giant filamentous bacterium, along with its life cycle. For most bacteria, … membrane,” Volland said. “And this is very unexpected for a bacterium.” Strange Encounters in the Mangroves The … the bacterial cells on the molecular level. They amplified, sequenced and assembled the genomes. In parallel, Gros’ lab …
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Natural Prodcast Episode 23: Aaron Puri
… of their synthases so that we can start to use the DNA sequence to predict or just understand better the language … your interest in getting into natural products. DAN: Why are you here at SIMB? AARON PURI: Yeah. Thanks Jackie. … your question but this gene cluster in this organism Methylobacterium tundripaludum is my favorite and is again, maybe …
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JGI Portals
… of microbial communities based on their metagenome sequence, in the context of reference isolate genomes … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and … resource hub that provides access to publicly available sequenced algal genomes and genome annotations generated by …
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Examining the cause of high inbreeding depression: analysis of whole‐genome sequence data in 28 selfed progeny of Eucalyptus grandis
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Natural Prodcast Episode 15: Katherine Duncan
Duncan: Yeah. I love actinomycetes. Dan Udwary: Tell us why. I mean, I know, but I think– Alison Takemura: I want to … of almost finished characterizing them. We’ve got genome sequences, which are just incredible. We’ve looked at the … new chemistry, and we want to understand the antimicrobial-resistant era, we need new chemistry. If we want to stop …
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Comparative Genomics Using the Integrated Microbial Genomes and Microbiomes (IMG/M) System: A Deinococcus Use Case
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High‐resolution genetic maps of Eucalyptus improve Eucalyptus grandis genome assembly
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Partnerships: Adopt-A-Genome
… in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Department of … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or … necessary to extract meaningful biological insights from sequence data, employing IMG data and tools for comparative …
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Complete Genome Sequence of the Cellulose-Degrading Bacterium Cellulosilyticum lentocellum
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