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FICUS-NERSC/KBASE
The mission of the Joint Genome Institute is to serve the scientific … … For sequencing projects, once work is under way, raw sequence data is released to NCBI’s Sequence Read Archive on a regular basis, in accordance with …
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Special Initiatives & Programs
… ,  Science Focus Areas  (SFA) opportunities, and the  Office of Science Early Career Research Program .   If … capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … breakthroughs in basic science, and is exploring microbial-based synthesis of fuels beyond ethanol. … The JGI …
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Natural Prodcast Episode 14: Nigel Mouncey
… … DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … I did my undergraduate in microbiology and then PhD in microbial genetics in the UK. And came across to the US for … to some people more about down the road. Email Nigel! He’ll sequence whatever you want!  [LAUGHTER]  NIGEL MOUNCEY: We …
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Synthetic Biology Lab
… as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … We focus our efforts on integrating database mining and sequence design with scaling the production of large, … to improve automated assembly pipelines bringing in new technologies, in particular through adoption of lab …
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Scientific Advisory Committee
JGI Director to provide a scientific and technical overview of the JGI. The SAC is chartered to render advice, guidance, … technical input on large-scale production sequencing, new sequencing technologies, and related informatics; … and Environmental Research (BER) program, set the final sequence allocation for this program. …
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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
Large-scale comparative analysis leads to identification of biosynthetic gene clusters for novel secondary … metabolites for multiple applications The planet’s microbial diversity is immense, yet much of it remains … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI …
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Frequently Asked Questions: Project Management
Christa Pennacchio   … You can visit the Products & Offerings section of our website for more details, including … for functional annotation/curation of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) … I request a culture/slant/DNA of an organism that has been sequenced at the JGI? … How do I check the current status of …
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NeLLi — Symposium on New Lineages of Life
… 2023 Symposium” delving into the most recent expansions of the Tree of Life and latest discoveries toward the evolution of cellular complexity and microbial symbiosis. Further, the symposium showcases … Overview of Symposium Goals Metagenomic and single-cell sequence data have provided a means to access novel …
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Taking Stock of the Known and Unknown Microbial Space
Metagenomic datasets could help map out microbial diversity hotspots Over the past few decades, … in sequencing technologies have led to an abundance of microbial genomes becoming available to the global … genomic biodiversity. Using publicly available genome sequence data generated over the past three decades, their …
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Project Management Office
The JGI Project Management Office carries out a number of activities to facilitate world-class science. PMO works … Tijana Glavina del Rio Metagenomics         Danielle Graham Microbial Program Nancy Hammon Workflow Planning Manager …
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DNA Synthesis Program
The JGI’s DNA Synthesis Program supports a wide range of projects, from single-gene synthesis to the synthesis of … Program aims to generate large datasets to explore sequence-function relationships, advancing the discovery of … … Synthesis Capabilities & Offerings … BOOST … Integrated Microbial Genomes and Microbiomes … Mycocosm … Phytozome … …
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User Programs
… and analysis will be paid for by the Department of Energy’s funding of the JGI. There is no cost to the user and no granting of funds.   Proposal Call FICUS CSP Large Scale CSP New Investigator CSP Functional Genomics Status CLOSED …
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