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… A deep dive into microbial genomics reveals one bacterial species is made of four ecologically distinct … of SAR324 cells and their gene expression, the team then sequenced community genomes and expressed gene transcripts … see that SAR324 was made up of four ecologically distinct clusters, or ecotypes. These ecotypes fall into two main …

… global nutrient cycling, however they do so under strong constraints exerted by viruses. Research in the viral genomics … MVP: a modular viromics pipeline to identify, filter, cluster, annotate, and bin viruses from metagenomes. …

… algae, examining both natural populations and engineered strains. This approach allows for the identification of key … The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal genomes from across the Fungal Tree of … of fungi. Mycocosm enables users to navigate across sequenced fungal genomes, and to conduct comparative and …

… is also reflected in the strongly biased representation of sequenced genomes in the public domain, the bulk of which … T ., Klenk H. P., Kyrpides N. C. 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree …

… were lost in other forms of  Chloroflexota that adapted to marine environments hundreds of millions of years ago.  The … Terrestrial  Chloroflexota have certain traits that most marine  Chloroflexota lost when they returned to an ocean … those traits vanished in bacteria that evolved to inhabit marine environments, while echoes of others remain.  Until …

… comprising the largest public collection of plasmid sequences identified from genomes, SAGs, MAGs, metagenomes …

… in a dedicated set of genes called a biosynthetic gene cluster. However, most of these gene clusters remain silent under standard laboratory conditions. … The team also identified previously unknown promoter sequences within these gene clusters, offering new …