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Special Initiatives & Programs
… capabilities and products . A minimum request of 1 Tb of sequence data is required to qualify for BERSS. For DNA … with grants funded by DOE-BER requiring support from the JGI may  submit proposals here . Investigators … and personnel resources for genomic research and sequence-based science.  Projects include de novo generation …
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Synthetic Biology Lab
We focus our efforts on integrating database mining and sequence design with scaling the production of large, … on developing methods for converting digital information from sequence databases into biotechnological or environmental …
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Data Policy
… embargo starting at construct or strain delivery.  Detailed sequence information for constructs are made publicly … Proposals accepted before FY22 are transitioning away from producing use-restricted data. JGI proposals typically … project level to expedite the change in data policy. Data from projects for which JGI has not yet received samples as …
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FICUS
FICUS call with EMSL begin with a Letter of Intent (LOI) from a researcher, briefly describing the project … The ranked proposal list, along with a recommendation from management at the JGI and the other participating …   Biological Small-Angle Neutron Scattering (Bio-SANS) instrument available at Oak Ridge National Laboratory  Center …
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Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
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How To Use Our Systems
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Zhong Wang
… metagenome and metatranscriptome assembly, Hadoop based on sequence analysis framework, etc. For example, this group … was responsible for the terabase scale data analysis in the cow rumen and sheep rumen metagenome projects. Standing at the …
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Scientific Advisory Committee
… (CSP). A crucial job of the committee is to take the input from the CSP Proposal Study Panel on prioritization of CSP projects and, with concurrence from the DOE Office of Biological and Environmental Research (BER) program, set the final sequence allocation for this program. …
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Environmental Genomics Group
… approaches to identify and characterize genomic information from uncultivated microbes and viruses. We develop computational approaches to …
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Natural Prodcast Episode 3: The Primer, Part 3
… maybe it’s a new culture of a new bacteria that you pulled from the soil, maybe it’s, you know, we talked about … able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the … Something that’s you know …  ALISON: Central! DAN: That’s why they called it that! But for, maybe, people who are less …
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Cataloging the Microbes that Manage the Health of River Systems
Database provides details on river microbes in 90% of US continental watersheds. The Science In … researchers describe a dataset of microbial genomes sampled from rivers covering 90% of the watersheds in the … program at Pacific Northwest National Laboratory. The JGI sequenced over 1,000 metagenomes and established …
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Toward Understanding Phage:Host Interactions in the Rumen; Complete Genome Sequences of Lytic Phages Infecting Rumen Bacteria
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