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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae … The Secondary Metabolites Program targets the vast and underexplored … computational analyses of BGC size and complexity, BGC sequence composition, metabolic similarity & compatibility, …
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CSP New Investigator Call
… The CSP New Investigator Call is for investigators and research initiatives new to the … the foundation for a large-scale CSP proposal submission. Sequence requests should not exceed 3 Tb in total. Proposals … All proposals will be externally peer-reviewed for scientific merit, …
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A Grass Model to Help Improve Giant Miscanthus
… Miscanthus  sequence offers insights into benefits of polyploidy and perenniality. The Science A reference genome sequence and genomic toolkit for the perennial grass … which could help in optimizing highly productive hybrids. Like other perennials, Miscanthus is dormant during the …
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Partnerships: Adopt-A-Genome
… “Adopt a Genome” is an informal program for faculty to … in the analysis and publication of the claimed genome sequences. This opportunity, provided by the Joint Genome … builds upon thousands of microbial genomes that have been sequenced by the JGI though not formally analyzed or …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information … Our research focuses on the assembly of metagenomic sequence data … qSIP quantifies incorporation of isotopes from labeled nutrients …
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First Monoploid Reference Sequence of Sugarcane
… Sorghum genome serves as a reference for the highly complex sugarcane genome . The … and their complex genomes are more difficult to sequence and assemble, in turn limiting the use of modern, … purified to produce alternative biofuels. A C4 plant like sorghum and maize, sugarcane can grow on …
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Comparative analysis of GT14/GT14-like gene family in Arabidopsis, Oryza, Populus, Sorghum and Vitis
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JGIota: The Algae Nicknamed ‘Chlamy’
… This shorter episode is about a tiny, single-celled alga – Chlamydomonas reinhardtii … UC Berkeley plant biologist Sabeeha Merchant explains why she works on this alga, how researchers managed to sequence its genome, and what it has to teach us about other …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize RNA virus sequences.  A zoo once offered a coloring book featuring … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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Webinar: MycoCosm Tutorial
… Learn more about JGI’s  MycoCosm data portal , an interactive collection of sequenced fungal genomes, omics data and comparative … to load data in standard formats or contact us if you would like to share your data with other researchers 13.  Q: Is it … The U.S. Department of Energy Joint Genome Institute, a DOE Office of …
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JGI & KBase at PAG XXVII
… The Plant and Animal Genome XXVII Conference (PAG) takes place January … integrative biology. Researchers who are applying genomic sequence information to BER-funded activities of plant …
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JGI@25: Strengthening Soybean
… In honor of the JGI's 25th anniversary in 2022, we have revisited a number of notable … impressive environmental and energy advantages explain why soybean is a flagship genome of the JGI’s Plant Program. … first legume species with a published complete draft genome sequence. At the time, the vital global source of both …
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