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Who We Are
The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at Lawrence Berkeley National Laboratory. The JGI consists of around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and …
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Metabolomics Program
The JGI’s Metabolomics Program works to uncover the roles of … biogeochemical processes, development of high performance plants and microbes, and understanding microbiome … matches associated with genes.  … Metabolomics Offerings & Capabilities … Metabolite, Annotation and Gene Integration … …
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Bacteria and Fungi Divvy Up the Work in Forest Floor
… down tough plant fibers. The Science Walk in a temperate forest filled with Norway spruce trees, and microbial … the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User Facility located at … the Facilities Integrating Collaborations for User Science (FICUS) initiative, which allows researchers to integrate the …
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Natural Prodcast Episode 6: Marc Chevrette
… describe. [ Go here to learn more about Tiny Earth and the JGI’s role in the project by watching Amanda Hurley’s … Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … I think, quite fascinating because it plays out on a geographic scale that’s only a couple kilometers. ALISON: You …
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User Support
The JGI Project Management Office carries out a number of … work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the … to Ship Samples that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. …
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CSP Large Scale Call
… leveraging systems-based approaches to unravel functional capabilities of plants, microbes and microbial communities, … that are listed in the call and leverage the diversity of JGI technical and analytical capabilities. All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data …
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Integrating Experimentation with Data
…   Join the Joint Genome Institute (JGI) and the Environmental Molecular Sciences Laboratory (EMSL) for “Empowering Automated Laboratories: Integrating …
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Natural Prodcast Episode 8: Eric Schmidt
… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … can use peptides for! That’s what his collaboration with JGI is all about, and we talk about it a bit here. I have … lot of work in this area, and developing RiPP biosynthetic capabilities to engineer peptides is part of a collaboration …
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Natural Prodcast Episode 7: Ben Shen
… of secondary metabolism.  DAN: Hello, and welcome back for Episode 7 of the Natural Prodcast. It’s been about a … think his energy is infectious. DAN: I’ll say up front that JGI recently started collaborating with Ben and his group to … understand how nature is making compounds, but we are also applying CRISPR technology, anything as genome editing, …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… not good at that, you guys. I’m trying really hard just for you. And the JGI Comms team. But mostly you. Anyway…I’m really happy … podcast. BETSY PARKINSON: Awesome. Thank you so much for having me. Really excited to be here. DAN: Happy to have …
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Natural Prodcast Episode 15: Katherine Duncan
… inside them. And this was, I think it must’ve been about 2001, maybe, and so it was before smartphones and before laptops and everything. And I … you have a question, or want to give us feedback, tweet us @JGI or to me @danudwary. That’s D-A-N U-D-W-A-R-Y. If you …
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Data Ecosystem
… as well as ensure cohesive data standards, the JGI partners with a number of facilities.  … Through its … to both expertise and infrastructure to facilitate these efforts. Particular areas of emphasis will be the development … Data Resources are authoritative providers of data or capabilities in their respective subject area. … The NMDC is …
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