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Virocell Necromass Provides Limited Plant Nitrogen and Elicits Rhizosphere Metabolites That Affect Phage Dynamics.
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FICUS Overview
The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … of Energy Office of Science National User Facilities into their research. In recognition of the increasingly collaborative and multidisciplinary nature of DOE mission science projects, this initiative aims to …
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In Hot Spring Microbial Mat, Viruses Ride “Piggyback”
In microbial mats, communities of microorganisms live among viruses that infect them. But what trends govern those … Do generalist viruses run rampant, capable of infecting different host species? Or, do they tend to specialize, … an estimated 40 to 80 percent of all the microbial cells on Earth. As microbial predators, viruses are able to …
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Genome Insider
… that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the … encoded in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to a more sustainable … world. Learn about JGI-supported projects, delving into the researchers’ motivations, the insights that amaze …
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Natural Prodcast Episode 10: A Primer on Genome Mining
… and scientists of secondary metabolism. Welcome back for our second season of Natural Prodcast. This first … of energy and environment. And so we know that lots of different types of organisms make lots of different types of … worked is people who were trying to find gold would go out into the hills. And they knew from example that gold is a …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user … staff in the Integrative Genomics Building in Berkeley, California.  Our location at the IGB fosters team science and collaboration with partner organizations such as the DOE Systems Biology Knowledgebase and the National …
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Cynipid wasps systematically reprogram host metabolism and restructure cell walls in developing galls
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Engagement Webinar: How to Apply for Resources at Multiple DOE User Facilities
… co-hosted a JGI Engagement: Accessing Resources at Multiple DOE User Facilities with a Single Proposal webinar, inviting researchers to apply for access to multiple genomics and molecular … how much help can users expect for data analysis of the different omics analysis? Are users expected to be trained …
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Examples: Successful LOIs & Submissions
See below for examples of successful Letters of Intent to our … Genomics, and Facilities Integrating Collaborations for User Science calls. These documents have been shared … … Elucidating Sphagnum microbiome genetic interactions for improved growth at elevated temperatures … Adaptive …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… in various shades of white. To researchers searching for sequences of RNA viruses in large data sets, their work may be akin to … Genomes & Microbiomes (IMG/M) system. “We then looked into many more samples and refined our methodology,” Neri …
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User Support
… a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with users to develop … work and outline roles and responsibilities resulting in a formal Statement of Work (SOW). All work performed at the JGI is initiated via the Work Initiation …
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Here, There and Everywhere: Large and Giant Viruses Abound Globally
… expands the global diversity of large and giant viruses. While the microbes in a single drop of water could … large and giant viruses offered the researchers insights into how they might interact with their hosts, and how those … the phylogenetic tree of giant viruses. Metabolic Reprogramming a Common Strategy for Large and Giant Viruses …
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