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DOE Metrics
… (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … Actual Operation = 24 days due to significant sequencer downtime related to the shelter-in-place. ††† Actual Operation = … analyze complex genomic datasets. [Download PDF]   FY 2014 Overall Sequencing Progress, Updated Quarterly Quarter Total …
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Simon Roux
Dr. Roux joined the JGI in 2017 to lead viral genomics research as part of the Metagenome Program. His responsibilities include the … Nature Microbiology 4, 1895–1906. Schulz et al., 2020. Giant virus diversity and host interactions through global …
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Genome Insider
Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences … encoded in plants, fungi, microalgae, environmental viruses, and bacteria to contribute to a more sustainable …
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Synthesis
… and novel automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables … CRISPR gRNA design tool  … BOOST provides a suite of tools to automate sequence design for assembly by Gibson, …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … of the field today. So, not as much of a preamble this time. Let’s jump right in. — DAN: So secondary metabolites. … a little bit more giving. DAN: Alright, so I think we’ve covered a little bit about why they’re important. But one of …
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User Executive Committee Charter
… users and their science including technical capabilities offered, proposal review procedures, and the annual user … recommendations to the JGI regarding technical capabilities offered, including areas where more or less capacity is … investigator who has been an active user of the JGI at any time in the past two fiscal years is eligible for election …
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Hidden diversity of soil giant viruses
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A giant virus infecting the amoeboflagellate Naegleria
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Natural Prodcast Episode 7: Ben Shen
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … I’m hoping to get a new one out every two weeks. This time, we’ve got a great interview with Ben Shen, from the … have a lot of listeners downloading this from countries all over the world – as many from outside the US as inside – and …
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JGI@25
Celebrating 25 years of genomics research 2022 marked the JGI’s 25th anniversary. We revisited a number of notable achievements that showcase our collaborations and … the JGI’s 25th anniversary, the JGI mural references dozens of iconic JGI contributions to advancing the frontiers of …
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Natural Prodcast Episode 12: Nadine Ziemert
… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast, a … DAN UDWARY: I mean, I get that, too, so. But so I’m over sensitive to it sometimes. Well, welcome, Nadine. … even in primary metabolism or in certain snips of viruses or something. I don’t know. Then I think making sure …
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Uri Neri
… is a computational biologist who spends his days wrangling viral genomes and occasionally remembering to document his … – though he'll take a look at anything related to microbial parasites. When not debugging pipelines, he can be found … just "spicy messenger RNA", and that somewhere in the mess of genetic sequences lurks the next cool virus – if only our …
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