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scMicrobe PTA: near complete genomes from single bacterial cells
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Plant Program
… on Phytozome … Phytozome is the JGI's Plant Comparative Genomics portal. Families of related genes representing the … accessions) and protocols (transformation, crossing, mutagenesis) are available to the community.   … EcoFABs link … high-quality de novo assemblies for very large-scale single genomes, based on the JGI assembly tool meraculous. …
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MeCorS: Metagenome-enabled error correction of single cell sequencing reads
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Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
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Natural Prodcast Episode 11: Marnix Medema
… of hooks into IMG’s data. IMG being Integrated Microbial Genomics at JGI, a large data set of bacterial genomes. And … episode, we talked about genome mining through some metagenome associated genomes. And yes, antiSMASH is … sometimes correlated or anti correlated, also with other cellular functions in the same and as it was other bacteria …
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Partnerships: Adopt-A-Genome
… with some of the latest developments in microbial genomics, metagenomics, and computational biology, and to empower them … datasets encompassing >150,000 isolate genomes, 230,000 metagenome-assembled genomes (MAGs), and 40,000+ metagenomes …
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Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria
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JGI Portals
… … Download plant, algal, fungal and microbial genomes and metagenomes — top-quality genomic data, open to all … comprehensive access to information regarding genome and metagenome sequencing projects, and their associated metadata, … access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm enables users to navigate across …
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Community Science Program
PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic … biological function. The  New Investigator and Functional Genomics calls do not require an LOI.  Projects will be …
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Natural Prodcast Episode 9: Roger Linington
… the idea that you could go internationally to do the next stage of your training and that there might be more to be … advancement in sort of both areas. And I suspect that no single change will resolve the problem. But that stepwise … carefully at these as being candidates siderophores. Or for cell-cell signaling or for, you know, other other roles …
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Metabolic potential of a single cell belonging to one of the most abundant lineages in freshwater bacterioplankton
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Primer and platform effects on 16S rRNA tag sequencing
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