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Annual Meeting 2027
… in March 2027 at the Oakland Convention Center. Check this page as further details become available. Sign up for our …
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Natural Prodcast Episode 9: Roger Linington
… the idea that you could go internationally to do the next stage of your training and that there might be more to be … how best to begin. And so in the end, we did it in several stages. So we started out internally by making a list on the … many there are to find. Conservatively, we estimate perhaps 40,000. The best we can do is take sections of the …
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Natural Prodcast Episode 5: Brad Moore
… marine natural products. And was at the university for over 40 years. There were four of us as kids in the family. I was … marine natural product biosynthesis and at the beginning stages of connecting molecules and genes. And then genomics … would spend time between our two laboratories doing metagenomics, some genomics. We were a little concerned …
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JGI@25: Expanding Metagenomics to Capture Viral Diversity
… Beginning in the early 2000s , these environmental metagenomes began to offer a window into viral existence. … to boost understanding of environmental viruses. In 2016, Nikos Kyrpides at the JGI led a team that combed datasets from …
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An Automated Tool for Assessing Virus Data Quality
… recovered and identified from environmental samples (metagenomes). However, the quality and completeness of … first author in the Microbiome Data Science group led by Nikos Kyrpides. To demonstrate its utility, Nayfach applied CheckV … Foundation (FAPESP). A.P.C. received a scholarship #2018/04240-0 from FAPESP. …
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Interdisciplinary delegation from the University of Duisburg-Essen explores collaborative opportunities with Lawrence Berkeley National Laboratory
… at the University of Duisburg-Essen in Germany in 2024 and 2025.  Participants from the UDE were Alexander … Berkeley Lab were Lauren Belisario, Greg Hura, Jan Kern, Nikos Kyrpides, Trent Northen, Robert Kostecki, Susan Tsutakawa, …
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JGI Advisory Committees Code of Conduct
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Mining Metagenomes for Cas Proteins
… by searching for Cas12d homologs across IMG/M’s assembled metagenomic data. It turned out that some of these were … a starting point, JGI data scientist David Paez-Espino in Nikos Kyrpides’ Microbiome Data Science group mined the IMG/M … Cas14 proteins on IMG/M portal …
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Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1
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Plant Microbial Interactions Group
… rhizobacterium (PGPR) Pseudomonas simiae WCS417. One suggested function of these phage genes is the … 10.1038/s41579-020-0381-4 10.1038/s41396-020-0637-z 10.1038/s41477-024-01666-3 …
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JGI Launches Latest Strategic Plan
… Biosciences Associate Laboratory Director, of the 100-page document with over 200 actionable milestones. JGI … leadership role in a Microbiome Data Science effort (pages 37-39) and the launching of a Secondary Metabolites research group (pages 47-49). “Our hope is to circulate this document widely …
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JGI Welcomes New UEC Members
… a breadth of institutions, research topics and career stages. The election period concluded on October 21. The … To view the full roster of members visit the UEC page . …
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