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… MARCY: What are those– they make chemistry! And so they – secondary metabolites, specialized metabolites, however we … to that and what you guys do when you’re exploring your systems. Because I think the JGI has a little bit of a … done a lot of work learning about how to use statistical analysis to prioritize both to analyze our bigger system …

… about natural products and the science and scientists of secondary metabolism. Natural products, secondary metabolites, and specialized metabolites all refer … talks to luminaries in the field about current and future developments, and how the JGI can be part of that space.   …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  Brad Moore, UC San Diego and Scripps … wanted to be true to my roots, and always work with marine systems because that’s just where my innate curiosity and … Pacific Ocean, or in the bay, and be able to do chemical analysis, as well as transcript analysis. And what we’re …

… Prodcast,” a podcast about the science and scientists of secondary metabolism.  DAN: Hi again, and welcome to Episode … in putting antibiotics together, getting them out of the cell letting them do their dirty work. So that’s one arm. … to unpack experimentally. But there’s a couple of different systems where people have made strides in that area. Where I …

… data. The JGI Data Policy applies to research data and analysis products (referred to as “data” for the remainder … : A period in which data is not publicly available in JGI systems or outside repositories. Full access is granted to … in which data is publicly visible and available in JGI systems. Users not involved with the proposal under which …

… about natural products and the science and scientists of secondary metabolism. Welcome back for our second season of … would have really done a somewhat exhaustive chemical analysis of a bacterium that they’re interested in, usually … peptides, remember, are big, complicated enzyme systems that really just exist to pull an amino acid out of …

… the genes for and explore the chemistry of quorum sensing systems, specifically the acyl homoserine lactones.  If you … predict or just understand better the language of microbial cell-cell communication. And he told us about his work in … of these organisms? What’s its name? And what kind of secondary metabolism has it got? AARON PURI: Yeah. OK. So I …

… sample and project metadata, and to access JGI tools and systems. … Analysis and annotation of publicly available projects can … ) Metagenomes and Single Cells: IMG/M   (citation: … of your genomes Microbial (IMG–ER) Metagenome and Single Cell (IMG/ M-ER) Fungal (Mycocosm) Algal (Phycocosm) …

… IMG/M system serves as a community resource for comparative analysis and annotation of all publicly available genomes … web portal provides data access, visualization, and analysis tools for comparative genomics of fungi. Mycocosm … The SMC provides complete sequence and annotation data for secondary metabolite biosynthetic gene clusters (BGCs) …

… a genomic model to study drought tolerance in perennial grasses using Panicum hallii (Hall’s panicgrass), by generating two complete genomes from varieties … team conducted several large-scale field experiments and analysis to find relationships between sequence variation …