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CSP Large Scale Call
… The Community Science Program Large Scale call is focused on genomic science projects that address biological functions for biomanufacturing, critical … and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
Learn more
Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of … NIGEL MOUNCEY: Oh, sure. I think our legacy obviously is in sequencing.  DAN: Of course.  NIGEL MOUNCEY: Sequencing the wazoo out of anything that’s relevant to the … Episode Transcript … Our guest on this episode is Dr. Nigel Mouncey , JGI’s Director, and also lead of …
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User Support
… Office carries out a number of activities to facilitate world-class science. DOE JGI Project Managers collaborate with … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … issues that may arise. You may monitor the status of your sequencing project at any time by logging on to the My Data …
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Synthetic Biology Lab
… The Synthetic Biology lab is divided into a DNA synthesis production group and a synthetic … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The … For further details, please reach out to the Group Lead …
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Natural Prodcast Episode 17: Cassandra Quave
… Dan Udwary: Hey everybody! Welcome back for Natural Prodcast … things, because a lot of what we do at JGI in terms of the sequencing that we do is very people-disconnected, and … methicillin-resistant Staphylococcus aureus . Can you share why finding treatments for these microbes is so important? …
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Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … list of open calls ; click on the call link to see specific details including project types supported, sample/capacity …
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New Lineages of Life Group
… Our research is focused on the discovery and characterization of novel bacterial, archaeal and … Exploring the fascinating world of giant viruses, which challenge our understanding of viral complexity and evolution Our research … Understanding the complex relationships between microbes and …
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Engagement Webinar: Utilizing long-read sequencing for metagenomics and DNA modification detection
… This webinar focused on how the JGI employs single-molecule, long-read DNA sequences to aid with genome assembly and … metagenome assemblies. Q&A from the Webinar: Input & sequencing Q(uestion): How much DNA is needed for “regular” … and cleanup. The JGI provides integrated high-throughput sequencing and computational analysis that enable …
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Secondary Metabolites Program
…   The JGI’s Secondary Metabolites Program focuses on the exploration of secondary metabolites across bacteria, fungi, algae and plants. These molecules, which are not essential for … The Secondary Metabolites Program targets the vast and underexplored reservoir of secondary metabolites produced …
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Environmental Genomics Group
… Research in the Eloe-Fadrosh group focuses on using genome-resolved metagenomic approaches to identify and characterize genomic information from … Our research focuses on the assembly of metagenomic sequence data into microbial genomes, which is of fundamental value …
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A Better Way to Find RNA Virus Needles in the Proverbial Database Haystacks
… Team develops a computational pipeline to sift and characterize … and viruses vastly outnumber the microbes. Advances in sequencing technologies and computational tools have … to defend against RNA,” Roux noted, “although it’s unclear why this is so rarely detected.” Developing Approaches for …
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From Sample Shipments to Sequences – A Tour of the JGI’s Sequencing Pipeline
… Every year, the JGI sequences around 35,000 samples — from plants, algae, bacteria, archaea, … samples in from afar, without ever hearing much about the sequencing lab. So today, Chris Daum walks through the JGI’s sequencing pipeline, where there are freezers with names — …
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