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A new view into a symbiosis could offer benefits to address climate change: pulling … with less fertilizer. For millions of years, underground fungi have lived in symbiosis with plant roots. Plants … one of the first cross-kingdom spatially-resolved transcriptomics studies to date. This paper  is the cover article for …

Genome Insider is a podcast that showcases the work of JGI collaborators in brief forays, connecting audiences with the people behind the … — and harness — the superpowers encoded in plants, fungi, microalgae, environmental viruses, and bacteria to …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … bacterial sacred metabolite, and ergot alkaloids come from fungi, and Taxol from plants. Plants, fungi, bacteria, … projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, and natural products in plants, fungi, …

… on genomic science projects that address sustainable biofuel and bioproducts production, leveraging systems-based … All proposals will be externally peer-reviewed for scientific merit, DOE mission relevance, proposed data … For accepted proposals, sequencing, synthesis, metabolomics and analysis will be paid for by the Department of …

Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting …

… know that that’s ever necessarily like a good description of anyone because chemistry means a lot, especially when … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much … you try to tackle that? Would you do that through metabolomics or sequence or both or–?  MARCY: So we do so much more …

… … DAN UDWARY: You’re listening to the Department of Energy Joint Genome Institute’s Natural Prodcast– a … think the important thing to remember is that, thanks to genomics, we now know that it is very hard to find stuff that … of natural product biosynthesis in bacteria ” The ActDES publication came out after we talked. It looks like a great …

… for an encyclopedia of reference genomes for fungal metagenomics. Two more CSP proposals came in 2016 that would … of Georgia, along with 100 of his colleagues in the comparative plant genomics community. The project’s aim is … genomes that are both large and complex. The first publication of a genome generated by the OGG initiative — …

Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial Microbiology and Biotechnology (SIMB) Natural … like a conical tube, like a 50 mil Falcon tube, that visually looks like a piece of candy corn. Right? It’s like …

… which is also focused on single-cell and spatial transcriptomics technologies. JGI Science Programs Deputy Axel Visel … collaboratively developed for this purpose by the JGI plant comparative genomics data portal  Phytozome and will be … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …

… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of the real legends of natural products, Professor Bill … from the ocean. We didn’t know whether to study bacteria, fungi, archaea, the whole range of microbial life. So, we …

… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a … penicillin from the fungal species – probably told us that fungi could be very productive sources for, say, biological …