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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 … individual user facilities. A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics … provides customized analysis, the JGI also participates in publication of results. …
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VISTA Region Viewer (RViewer)—a computational system for prioritizing genomic intervals for biomedical studies
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Synthetic Biology Informatics Group
… Software engineers in the Synthetic Biology Informatics Group develop, deploy, and maintain software that … CRISPR gRNA design tool BOOST , which provides a suite of tools to automate sequence design for assembly by Gibson, … and Golden Gate methods SynTrack and associated tools, which track samples through the JGI’s Synthetic …
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Tour the IGB
… to advancing the frontiers of environmental and energy genomics.  For more information about the science depicted, click here . …
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Special Initiatives & Programs
… sequencing, synthesis, and targeted metabolomics support for DOE-BER funded awards, including awards funded through  … in the BER funding call, proposals are NOT eligible for BERSS support through the JGI (with the exceptions of … DE-FOA-0003453 and DE-FOA-0003615 , which are both eligible for BERSS). Available Resources All JGI products are …
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User Support Analysis Group
… The User Support Analysis group provides computational analysis for new technology development and JGI user science … focus areas being genome variation, transcriptomics and epigenomics. Our work varies in scope from the development of …
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Community Science Program
… sequencing, synthesis, and metabolomics at the JGI for projects of relevance to Department of Energy (DOE)  … fall under the umbrella of our CSP: The Large Scale call is for expansive projects that leverage a range of JGI … PIs who have never led a JGI project, and the Functional Genomics call is for projects that translate genomic …
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DAS Tool for Genome Reconstruction from Metagenomes
… cycling to plant health and growth. Developing a scalable computational approach that provides researchers with the … a team of researchers has been working on improving methods for isolating and characterizing entire microbial genomes … from complex metagenomes than any of the single binning tools alone,” primarily because of its capacity to harness …
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Natural Prodcast Episode 8: Eric Schmidt
… of secondary metabolism.  DAN: Hey there and welcome back for Episode 8 of Natural Prodcast. This week, we have our … Eric Schmidt, from the University of Utah. I’ve known Eric for a long time – we worked together on Aflatoxin … learn how to make peptides, rationally. We’d find these tools, we’d understand them, and we’d apply them. And so, I …
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Mission
… and AI-driven analyses that convert biological information into actionable insights and solutions. … conversion efficiency, and discover microbial pathways for producing biofuels, biochemicals, and other high-value … reveal biological routes to recover, reuse, and transform critical minerals. This knowledge supports developing …
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Natural Prodcast Episode 6: Marc Chevrette
… Marc was the Head of Experimental Genomics there, before he decided to leave for graduate school and pursue his … and I’m really excited about it. Because now we have the tools through genomics, and metabolomics, to ask these … For sure.  MARC: We were basically, Dan and I and one other computational biologist were tasked with looking at, you …
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Offerings & Capabilities
… needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and …
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