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Natural Prodcast Episode 11: Marnix Medema
… … Dan Udwary: You’re listening to the Department of Energy … center and a lot of the really important recent events in data analysis and secondary metabolism over the last decade … genome miners use, including antiSMASH, MIBiG, and newer efforts, like BiG-scape and BiG-SLiCE, and now the BiG-FAM …
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Natural Prodcast Episode 16: Marcy Balunas
… … DAN: Hey Marcy!  ALISON: Hey Marcy?  MARCY: Hello. How’s it … in natural products right. There’s many different avenues toward chemistry. But that’s kind of where I had you. How … And we’ve done some work with those and have a couple of publications out there on the chemistry. There’s so much …
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JGI Portals
Our data platforms are a key resource for the broader scientific … to meet the ever-changing demands of our users. … Download plant, algal, fungal and microbial genomes and metagenomes — …
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Project Management Office
The JGI Project Management Office carries out a number of activities to … help with: preparing a Statement of Work, completing a formal User Agreement, and ultimately launching the user’s … of samples for sequencing, or the submission of sequencing data for synthesis – the DOE requires that all work …
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Natural Prodcast Episode 2: The Primer, Part 2
… … DAN: You’re listening to the US Department of Energy Joint … so secondary metabolism is throughout nature, except maybe for animals and humans, not as much. You know, we have this … has been really crucial.  DAN: Yeah, yeah. The more data you generate, the more knowledge you can generate. So …
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Natural Prodcast Episode 1: The Primer, Part 1
… … DAN: You’re listening to the US Department of Energy Joint … Takemura, whose voice you’ll hear in a minute – we work for the US Department of Energy Joint Genome Institute, or … so now here at the JGI, I work with all of the sequencing data that the JGI produces to try to find and identify …
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Vision, challenges and opportunities for a Plant Cell Atlas
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Microbial Program
The JGI’s Microbial Program focuses on using cutting-edge sequencing, … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as … The program provides high-quality, large-scale genomic data to advance microbial research that drives sustainable …
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Frequently Asked Questions: Proposal Submission
See below for a list of Frequently Asked Questions about our proposal … begin, and all CSP proposals are subject to JGI policies on Data Release and Publication .   Except for applicants to the CSP New …
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Natural Prodcast Episode 5: Brad Moore
… … DAN: You’re listening to the US Department of Energy Joint … and SIO. Oh, I should say what those are. Brad: What’s SIO, for all those listeners out there? Dan: Scripps Institution … before you see toxin. And we have some preliminary data with other samples that we do see days to a week of a …
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Viral Genomics Group
Microbes drive critical ecosystem functions and affect global nutrient cycling, … overview and major challenges of host prediction methods for uncultivated phages.  Current Opinion in Virology .  49 … abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Natural Prodcast Episode 19: Bill Fenical
… … DAN UDWARY: Hey, everyone. I’ve got a great episode for you here today. We got the opportunity to talk to one of … this project too. I’m really looking forward to seeing the data when it finally gets off the sequencers. The pandemic …
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