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Getting to the Bottom of Fungal Functions Across Earth’s Forests
… between fungal guilds, genes and function. If a tree falls in the forest — whether or not anyone registers the sound — one thing is for sure: there are lots of fungi around. Within a forest’s soil, hundreds of species … vary across Earth’s ecosystems.  Recently, in work  published in  New Phytologist , researchers have pioneered new …
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Computationally Classifying Fungal Lifestyles
… Machine learning methods were applied on sequenced fungal genomes to classify gene families. The Science As a proof of concept, researchers developed an algorithm that … The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, …
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Mapping the Earth’s Hidden Fungal Kingdom
… collections of fungal genomes. A sweeping analysis published in Nature Reviews Microbiology of nearly 2,000 of these … Earth's fungal kingdom. The manuscript reviews about 200 publications linking evolutionary history and innovations … power comes transformative potential. The paper highlights how fungi produce "an incredible array of enzymes and …
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Events
…  Learn about meetings the JGI is hosting:   … New Lineages of Life (NeLLi) Symposium … The JGI is represented at conferences year round; find out where our researchers will be presenting next. Go here to learn about upcoming user-focused …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility located at … The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a … freely to the public databases. In 2004, the JGI established itself as a national user facility, and has grown to …
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FICUS Overview
… The Facilities Integrating Collaborations for User Science (FICUS) initiative was established in 2014 to encourage and enable researchers to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … provides customized analysis, the JGI also participates in publication of results. …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… right. Welcome back to Natural Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like I promised. Now I just have to make … on this. So we are right now-- we have just recently finished the synthesis of the first set of these molecules and …
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A new view of the tree of life
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Shedding light on spatial structure and dynamics in phototrophic biofilms
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Project Management Office
… The JGI Project Management Office carries out a number of activities to facilitate … to onboard users and guide them through the process of working with our facility. This includes help with: preparing a Statement of Work, … Please review our FAQ in advance of contacting the PMO office.  …
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Fungus Fuels Tree Growth
… Researchers start pinning down how a fungal symbiont spurs growth of poplar, a potential biofuel feedstock.     The Science … This work was supported by the Plant-Microbe Interfaces program at the Oak Ridge National Laboratory (ORNL) sponsored by the Office of Biological and Environmental Research at the …
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Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems
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