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FICUS Overview
… to more easily integrate the expertise and capabilities of multiple Department of Energy Office of Science National … A Letter of Intent is required. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be … provides customized analysis, the JGI also participates in publication of results. …
Learn more
Natural Prodcast Episode 22: Alison Narayan
… Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … [project] with JGI, how many flavin monooxygenases are you sequencing, sort of along that vein, of if you have one or … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: …
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Natural Prodcast Episode 8: Eric Schmidt
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … see as the overall “theme” of your research? I know you’ve generally worked in various marine organisms. Except during … took an approach that was kind of a simplified metagenome sequencing approach to pick this system apart.  DAN:  And …
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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This week, Alison and I talk to Roger … America brought to the UK? ROGER:  Yeah, it’s difficult to generalize, of course, but I felt overall that the British … us, we want to hear from you! We have projects in genome sequencing, DNA synthesis, transcriptomics, metabolomics, …
Learn more
Frequently Asked Questions: Proposal Submission
… See below for a list of Frequently Asked Questions about our proposal submission process. You can review successful letters of intent and submissions at the bottom of the page.  … Review the list of open calls ; click on the call link to see specific … supported, sample/capacity limits, and instructions.  Many of the submissions are done using web-based forms.   To view …
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DAP-seq Drives Robust Mapping of Gene Regulation
… Multi-species assays yield an unprecedented view of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … Now, with improvements to DNA Affinity Purification Sequencing (DAP-seq), these barriers are falling. As  …
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User Support
… the JGI will move to a new login service, requiring the use of an ORCID account with two-factor authentication enabled … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
Learn more
Natural Prodcast Episode 6: Marc Chevrette
… DAN: You’re listening to the US. .Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … the Broad that was looking to develop new methods for DNA sequencing of microbes. And what kept breaking our methods … that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their …
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Genome Insider
… The Genome Insider podcast brings listeners into the science … — JGI Users — and dives into their work on all kinds of organisms, from plants and fungi to microbes and viruses. …
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Natural Prodcast Episode 18: A CSP Primer
… while, but Natural Prodcast is back again for another round of episodes. If you stick around for the next few months, … Science program. It used to actually stand for Community Sequencing Program. Also CSP, same acronym. But as JGI, as a … do the bioinformatics and to synthesize these results into publication? So there’s this really important because we …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … and the 90s. And so we started to be able to explore DNA sequencing and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary …
Learn more
Secrets of the Needles: What Microbes do on Conifer Leaves
… Novel study looks at microbiomes in aerial surfaces of plants and their roles in plant health and environmental … in part by the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as well …
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