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Natural Prodcast Episode 19: Bill Fenical
… the most effective application, of marine molecules in general. DAN UDWARY: Maybe can you explain to our audience … that really looked promising. We found that there were new genera, these basic taxonomic group called the genus. We … Myers Squibb. And it is now in phase III in multiple sites, phase III human clinical trials. ALISON TAKEMURA: …
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Partnerships: Myco-Ed
… species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. …
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DAP-seq Drives Robust Mapping of Gene Regulation
… of plant evolution and adaptation.    Understanding how genes are regulated is like deciphering the complex wiring … a lot of action happening in terms of where those binding sites are in the genome — those sequences are moving around, … high-quality single-nuclei transcriptomes, enabling the identification of dozens of unique cell types in plants such …
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Mining New Frontiers: The Critical Minerals and Materials Joint Call
… such as fully annotated genome assemblies or differential gene expression results. For DNA synthesis projects, JGI … and phototrophs. Note that utilization or transfer of any genetic resource may be covered by local, national or …
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Streamlining Regulon Identification in Bacteria
… up associating transcription factors with their target genes. The Science Regulons are a group of genes that can be turned on or off by the same regulatory … demonstrated the efficacy and potential of regulon identification by in vitro transcription-sequencing …
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Secrets of the Needles: What Microbes do on Conifer Leaves
… and functional potential varied across tree species and sites, reflecting ecological patterns shaped by both local … The team learned that some bacterial families carry genes for degrading monoterpenes such as α-pinene, as well as genes for breaking down complex plant polymers. These …
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FICUS-NERSC/KBASE
… the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at … more customized analysis, the JGI also participates in publication of results. …
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Crystal structure of the FRP and identification of the active site for modulation of OCP-mediated photoprotection in cyanobacteria
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Natural Prodcast Episode 3: The Primer, Part 3
… and actually get to the DNA sequence – sequences for the genes that code for the proteins that produce secondary … developed to the point that you could understand the genetics of secondary metabolism, it became possible to do … proteins that are enzymes that are doing the reactions to generate secondary metabolites. ALISON: Sounds easy enough? …
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Sequencing Technologies & Products
… An assay used for profiling transcription factor binding sites across entire genomes. This technology has been …
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Natural Prodcast Episode 4: Nancy Keller
… After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was … looking at that I’m a very visual person. So, when we make genetic mutants in a fungal isolate, I can see something … induced by growing beside a bacterium and I’m sure the opposite way around, because they’re sending messages to each …
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Plant Microbial Interactions Group
… single-cell and spatial transcriptomics barcode-based genetics (RB-TnSeq), and computational genomics to better … strains, whereby they can modulate host metabolism, gene expression and phenotype. We have recently identified … simiae WCS417. One suggested function of these phage genes is the modulation of their bacterial host to colonize …
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