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Natural Prodcast Episode 17: Cassandra Quave
… I think on COVID that we’re getting ready to submit for publication and have found some interesting hits for that as … comes to our existing libraries. Some of the limitations of platforms like GNPS, it’s very poor in terms of annotations … And we looked at both the chemistry and the pharmacological effects against bacteria.  And what was interesting is that …
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User Support
… the use of an ORCID account with two-factor authentication enabled to log in. Check our Help Site for additional … that will be subject to the DOE JGI’s capabilities for sequencing, synthesis and/or metabolomics. Once materials … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   … by generating data in three overarching categories: DNA Sequencing , Biodesign and Metabolomics .  Many users rely … needs, the JGI deploys state-of-the-art sequencers and platforms dedicated to synthesis, single-cell analyses and …
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User Advisory Committees
… Genome Institute (JGI) commit to Lawrence Berkeley National Lab’s (Berkeley Lab’s) core values, which guide the relationships we nurture in our workplace and seek to establish … our stakeholders. The guiding principles for participating on JGI Advisory Committees are outlined in this Code of …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . … spinosyns. And so we had a high throughput screening platform where we’d look at 10,000, 15,000, 20,000 mutants a … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Single Cell Research Group
… Research in the Woyke laboratory focuses on the utility of single-cell methods to access genetic material of uncultivated taxa of interest. One such effort is targeted at environmental cells that are from candidate phyla, major branches … widening since 2005. This gap is also reflected in the strongly biased representation of sequenced genomes in the …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a user facility pioneering functional genomics to solve the most relevant bioenergy and … The researcher then submits a proposal for consideration in the next review cycle. All proposals undergo …
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DNA Synthesis Program
… of biofuels, biochemicals and other bioenergy solutions.  The program has been a pioneering effort in functional genomics since 2012, with a focus on addressing … Synthesis Program plays a central role in advancing functional genomics, focusing on developing genetic systems that …
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A collection of archaeal 16S rRNA Clone-FISH cultures for probe validation in fluorescence in situ hybridization experiments
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Fungal & Algal Program
… and algae to unlock their potential for bioenergy, environmental sustainability, and bioproducts. By sequencing and analyzing the genomes of these organisms, the … that enable fungi and algae to play a vital role in carbon cycling, biodegradation and biogeochemistry. This …
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16S rRNA Gene Amplicon Sequencing Data from Flooded Rice Paddy Mesocosms Treated with Different Silicon-Rich Soil Amendments
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Protocols
… by JGI and the JGI user community below for DNA preparation tools, high molecular-weight DNA extraction and RNA preparation.  JGI sample QC protocols can be found here . DNA … Tips for High Molecular Weight DNA extraction: … RNA Extraction Protocols: … iTag protocols: …
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