Search

… and biogeochemistry. The program’s focus is on large-scale sequencing efforts that survey the vast phylogenetic and ecological diversity of fungi and algae, … dramatically affect plant health. The  1000 Fungal Genomes Project is a five-year project to sequence 1000 fungal …

… among lots of other things, he works on the Tiny Earth project, which you’ll hear him describe. [ Go here to learn … that can’t live without their host. They have no extra genes hanging around, they still dedicate 20-30% of their … you for that insight. DAN: So I suppose, coming up with large collections of new microbes and new activities, feeds …

The focus of this group, in recent years, has been to bring generalizable technologies to bacteria, yeasts and algae … strains represent an additional phase of user-accessible project types, in which DNA-based molecules can be chromosomally integrated into a …

… enzymology. So, we talked about her JGI DNA synthesis project to explore the chemical capabilities of flavin … could have arisen from. DAN UDWARY: OK, so sort of a phylogenetic reconstruction kind of a thing. ALISON NARAYAN: … Sure. ALISON NARAYAN: And so we usually start on small scale in the lab. So we’ll run things in like little …

FY 2025 DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours … PacBio sequencing platforms. **Operating Hours target is based on 98% of the total available hours.   FY 2024 DOE … counted once, even though an individual may have several projects/roles. Sequencing Quarter Total Bases (Trillions) …

We focus our efforts on integrating database mining and sequence design with scaling the production of large, difficult to synthesize constructs such as those … We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and …

… resources empower students through isolation and genome sequencing of new fungal species.  Students collect fungi, sterilize tissue, isolate genes and more. The metadata then goes into iNaturalist. … links below. Naturalist Myco Ed Fungal Genomics Education Project MycoCosm MycoEd group page Protocols, teaching …

After I got my undergraduate degree, which was in general biology, I joined the Peace Corps. And when I was … anything to use natural products necessarily. Fungi are large. They’re microbes, but they’re large microbes. And … so, so cheap to sequence. Right now, for our particular projects, we’re not doing that right now, but we might. I …

I was imagining some massive contraption for amplifying genes. I wasn’t really sure what actinobacteria were. Dan … of North America. So then I came back and I worked on an EU project, the Scottish Association for Marine Science. And … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …

… at   Humboldt Universität zu Berlin   has developed an atlas that maps gene expression patterns in the  Arabidopsis root, profiling … with resulting reports and a  perspective article . Publication: Shahan R et al.  A single cell Arabidopsis root …

… in his science. And he was working with some really cool projects at that time. So I was pretty stoked to be able to … genomics existed. This is before we’re even thinking of genes and connecting genes to molecules, which is something … that year that the Pacific Northwest had experienced the largest bloom ever observed on planet Earth. This was the …

… information into biological function.  The emphasis is on projects leveraging JGI’s DNA synthesis and ‘omics capabilities to enhance understanding of gene and genome function, particularly those not readily … user and no granting of funds. … All proposals will be externally peer-reviewed for scientific merit, DOE mission …