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FICUS-NERSC/KBASE
Computing Center ( NERSC ) is to accelerate scientific discovery at the DOE Office of Science through high … the completion of a project, the JGI makes the assemblies, gene annotations, and analyses available to the community at … more customized analysis, the JGI also participates in publication of results. … Submission … More on Sequencing …
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Viral Genomics Group
… abundant ocean viruses.  Nature . 537:689-93. … Selected Publications … For further information contact the Group …
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Synthetic Biology Lab
We also develop methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and … on developing methods for converting digital information from sequence databases into biotechnological or … the design principles for successfully engineering pathways to function in heterologous hosts, by combining …
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Sequencing Technologies
… edge molecular capabilities and state-of-the-art next-generation sequencing to enable biological discovery by the JGI and external DOE users. Adopting the …
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Micro-Scale Applications Group
The Micro-Scale Applications group explores the genetic makeup of natural microbial communities using a variety of … assay lets us move beyond cataloging the genes of microorganisms and start making quantitative measurements that …
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FICUS Overview
… provides customized analysis, the JGI also participates in publication of results. … All proposals undergo technical … The ranked proposal list, along with a recommendation from management at JGI and the other participating …
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JGI Portals
… analysis and annotation of all publicly available genomes from three domains of life, in a uniquely integrated … host taxonomy, conjugation potential, antibiotic resistance genes, and ecosystem information. … The IMG/VR database … available sequenced algal genomes and genome annotations generated by the JGI and by others. The web portal allows …
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Events
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Shattering Expectations: Novel Seed Dispersal Gene Found in Green Millet
… that uses a carbon fixation process known as the C4 pathway, which particularly helps plants thrive in warm, … at Lawrence Berkeley National Laboratory (Berkeley Lab), generated genome sequences for nearly 600 green millet … leaf angle,” noted Schmutz. “It’s a nice example of de novo discovery and then mapping back to identify candidate …
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From Stress to Growth: The adaptive mechanisms of algae in changing Arctic waters
P. psychrophila genes drive resilience when salinity fluctuates. The Science … fertilizers. By understanding the genetic and metabolic pathways involved in stress responses, scientists can better … Sciences and Engineering Research Council of Canada (NSERC) Discovery program grants to C.L. Support from the Canada …
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Gene Expression: From On-Off Switch to Dial
Fine-tuning metabolic gene expression helps identify variants in yeast genes. The … library approach to tuning gene expression in metabolic pathways. Compared to the traditional way, which leverages … area in the DNA, to determine which targets might benefit from an intermediate level of expression. Similar to the …
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User Support
Project design with Principal Investigator Providing a general orientation to JGI systems to Investigators … specific milestones, either by automated emails or emails from your Project Manager. Your Project Manager will also … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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