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Natural Prodcast Episode 9: Roger Linington
… DAN: Welcome back for episode 9 of Natural Prodcast. This … when we were both postdocs at Scripps Institution of Oceanography. Roger was splitting his time between Bill Gerwick’s … at finding gene clusters. Or, there is a high degree of overlap between those two data sets, which we have not yet …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … 1) Review JGI sample QC requirements and protocols Obtaining DNA and RNA of suitable quantity and … to the  JGI. The documents below (posted with permission) demonstrate the importance of proper nucleic acid …
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Ronald de Vries
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Partnerships: Myco-Ed
… The Mycological Curriculum for Education and Discovery  (Myco-Ed) is a Course-Based Undergraduate Research Experience (CURE) that consists of … of high-quality fungal reference genomes, this program is an important initiative that expands and diversifies … integrate real scientific contributions/discoveries into undergraduate teaching laboratories with minimal overhead …
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Natural Prodcast Episode 3: The Primer, Part 3
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural … Yeah, I guess you’d use something like a gas chromatographer. Yeah. DAN: Yeah. So that involves figuring out the … Episode Transcript … This the third episode of Natural Prodcast, and the third and final part of our Primer conversation, …
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Jeremy Schmutz
… the JGI dates back to 1997, when he was working for the Stanford Human Genome Center, now the HudsonAlpha Institute … the completion of the Human Genome Project in 2003, he developed sequencing, assembly, and improvement strategies for de novo sequencing of eukaryotic organisms from simple yeasts …
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The ancient Salicoid genome duplication event: A platform for reconstruction of de Novo gene evolution in Populus trichocarpa
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Enhancing Terminal Deoxynucleotidyl Transferase Activity on Substrates with 3′ Terminal Structures for Enzymatic De Novo DNA Synthesis
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Microbial Program
… Microbial Program focuses on using cutting-edge sequencing, annotation and analysis techniques to explore the vast and … those associated with microeukaryotes, enhances our understanding of terrestrial biogeochemical cycling and … inter-organismal interactions. These insights are crucial for addressing key environmental challenges, such as …
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Engineering a Synthetic Escherichia coli Coculture for Compartmentalized de novo Biosynthesis of Isobutyl Butyrate from Mixed Sugars
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BBMerge – Accurate paired shotgun read merging via overlap
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Natural Prodcast Episode 24: Jackie Winter and SMC
… DAN UDWARY: Hey, everyone! Welcome to the “Self Promotion … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … GC-content, and other things. We don’t, say, have geographic information of wherever the thing was sampled from …
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