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Offerings & Capabilities
… by generating data in three overarching categories: DNA Sequencing , Biodesign and Metabolomics .  Many users rely … in strain engineering and functional assays and supporting new methodologies to enhance the integration of various data …
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Viral Genomics Group
… Microbes drive critical ecosystem functions and affect global … While an ever-increasing number of phage and virus genomes have been assembled and reported from metagenomes, our … and activity in microbial communities, however they can only provide a signal aggregated at the population …
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Natural Prodcast Episode 2: The Primer, Part 2
… without having listened to the first part, you might be a little lost, and I’d suggest you go back and check the … metabolites. I kind of inferred through the stories I told you about geosmin, which is a bacterial sacred … notable. We are still in – not an early stage. I think we can identify most secondary metabolism pathways now, but …
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How to Submit Sequencing Samples
… Below is a brief description of the process needed to prepare and ship samples for sequencing by the JGI.  Additionally it includes … and tracking statuses.  Please follow the steps outlined below. Click the drop-downs to learn more about each step in … Obtaining DNA and RNA of suitable quantity and quality has been the rate-limiting step for many projects at the JGI. …
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FICUS-NERSC/KBASE
… The mission of the Joint Genome Institute is to serve the scientific community as a … Reviewers consider technical feasibility and readiness to begin work, checking such factors as genome size, polymorphism level, sample quality and … more customized analysis, the JGI also participates in publication of results. …
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Frequently Asked Questions: Project Management
… You can visit the Products & Offerings section of our website … The “User” signing the JGI User Agreement will be an authorized representative from your institution … The User Agreement and corresponding Appendix must be signed and returned before work on your proposal may …
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User Support
… must prepare Materials (Samples) for Submission before they can receive an emailed Approval to Ship Samples that will be … by: Verifying metadata and coordinating with IMG , GOLD and others for data annotation and submission Tracking, … access your data, share with collaborators, and coordinate publication with JGI scientists. Synthetic DNA constructs …
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Sequencing Submission Requirements for DNA Synthesis
… Sequence files for all constructs should be emailed to  Miranda Harmon-Smith, Synthetic Biology …
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Plant Program
… A major focus are biofuel feedstock species and plant-microbe interactions, advancing efforts to create renewable energy sources and bolster agricultural resilience. … deep learning algorithms for gene annotation and protein folding models, to improve the accuracy of functional …
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JGI-TMF Critical Minerals and Materials Call
… to request the capabilities and expertise of both the Joint Genome Institute and the Molecular Foundry in one research … sequencing, synthesis, metabolomics and analysis will be provided for free to the PI by the Department of Energy’s … provides customized analysis, the JGI also participates in publication of results. Go here for additionial information, …
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Mission
… Biological systems hold extraordinary potential to power innovation in energy, … understand, predict, and design biological functions that can address complex challenges in resource resilience and economic growth. The DOE, through its BER program, plays a central role in advancing this frontier …
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Natural Prodcast Episode 21: Elizabeth Parkinson
… Prodcast. I did it. I’m keeping to my schedule. This should be coming out on the first Thursday of the month, just like … stuff, and I hope you enjoy it. And just to remind you, you can get transcripts, and show notes with links to papers … Bill does it all. A lot of people I think-- well, maybe I'm older, but-- [LAUGHS] I feel like a lot of people hedge …
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