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A New Actinobacterial Chapter in the Genomic Encyclopedia of Bacteria and Archaea
… collaborated with the U.S. Department of Energy (DOE) Joint Genome Institute (JGI), a DOE Office of Science User … Group. Many of these bacterial and archaeal genome sequences have been generated using techniques that the JGI … resource, but also yielding and supporting many high-impact publications ,” emphasized Markus Göker, who managed the …
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Natural Prodcast Episode 24: Jackie Winter and SMC
Breaking Bad, I guess. But no, you trained me in how to genome mine, so thank you for that. And you had to put up … And I think a lot of times, too, when we even look at publications, it’s always positive data, right? No one ever … BGCs but highly fragmented, in most of the metagenome sequences that we’ve already analyzed. But that’s a whole …
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Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genome
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JGI Advisory Committees Code of Conduct
Guiding Principles All staff members of the US Department of Energy (DOE) Joint Genome Institute (JGI) commit to Lawrence Berkeley National …
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Genome sequencing and mapping reveal loss of heterozygosity as a mechanism for rapid adaptation in the vegetable pathogen Phytophthora capsici.
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A One-Stop Shop for Analyzing Algal Genomes
… genes of more than 100 algae. The Science Interested in the genomes of algae? You now have one place where you can … sequence and understand. A team of researchers led by Algal Genomics Program lead Igor Grigoriev and data scientist Alan … system for microbial and metagenome datasets, MycoCosm for comparative analysis of fungal genomes, and Phytozome for …
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DOE Metrics
DOE Metrics Sequencing Quarter Total Bases (Trillions) Operating Hours Goal Actual Total* Actual % of Goal Goal (hours)** Actual Total Actual % Goal FY 2025 … developments for improving microbial, metagenomic, or plant genome assemblies. [Download PDF] Q2 – Report on progress …
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Natural Prodcast Episode 8: Eric Schmidt
… … DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … you’d like to read more about this, I highly recommend his publication last year, “The Biosynthetic Diversity of the …
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Natural Prodcast Episode 22: Alison Narayan
Welcome back to Natural Prodcast. This continues the series of interviews we recorded at the Society for Industrial … enzymes to do chemical reactions. Obviously, in my work, in genome mining, we have an awful lot of crossover, where us … And so there are different ways that we decided which sequences made it onto that list. So the majority of them …
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Synthesis
The Joint Genome Institute's DNA Synthesis Platform capabilities support researchers exploring how to … automations for DNA design, assembly and analysis Overview of synthesis products The JGI DNA Synthesis platform enables …
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Who We Are
…   The U.S. Department of Energy (DOE) Joint Genome Institute (JGI) is a national … around 280 researchers and support staff in the Integrative Genomics Building in Berkeley, California.  Our location at …
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Plant-Microbial Interactions Group
… are complex organisms that harbor a fantastic diversity of cell types and associated organisms, including fungal and … are influenced by microbial partners. We use a variety of genomics-powered tools to study this complexity, including … of plant/environmental responses … Selected Publications … Research Team Alumni … For further details, …
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