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Natural Prodcast Episode 7: Ben Shen
… DAN: You’re listening to the US Department of Energy Joint Genome Institute’s “Natural Prodcast,” a … started collaborating with Ben and his group to work on sequencing, synthesis and genome mining technology to help … on DNA sequencing and synthetic biology. But also the metagenomics and gut microbiome, as I think that it’s like a …
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Programs & Platform Leads
… As an Integrative Genome Science User Facility, the JGI plays a … genome science capabilities to support BER's mission of achieving a predictive understanding of complex … that cross the boundaries of the Plant, Fungal, Algal, Microbial, Metagenome, Metabolomics, Secondary Metabolites, …
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Natural Prodcast Episode 14: Nigel Mouncey
… DAN: Hello, everyone, and Welcome back for Episode 14 of Natural Prodcast . There’s been a lot going on, so I took … NIGEL MOUNCEY: Oh, sure. I think our legacy obviously is in sequencing.  DAN: Of course.  NIGEL MOUNCEY: Sequencing the … help the Society grow. And so I’ve been the chair of the publications committee for the last, what is it now, five …
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Natural Prodcast Episode 15: Katherine Duncan
… here today, and we wanted to talk to her about a whole list of things. So we have a Scripps background shared together, … before– or kind of around about when the first genome sequencing was done. But natural products– marine natural … is a whole bunch of information that maybe never makes its publication. And these are little tips, you know, how to …
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User Executive Committee Charter
… Executive Committee (UEC) represents the JGI user community and is responsible for providing input and advice on JGI policies and practices that … users and their science including technical capabilities offered, proposal review procedures, and the annual user …
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Offerings & Capabilities
… The central mission of the JGI’s Genomic Technologies department is   ensuring … users have access to cutting-edge capabilities to help advance their science by generating data in three overarching categories: DNA Sequencing , Biodesign and Metabolomics .  Many users rely …
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Metagenomic Sequencing of an In Vitro-Simulated Microbial Community
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Synthetic Biology Lab
… lab is divided into a DNA synthesis production group and a synthetic biology applications group. The DNA … as user facility that aims to provide access to state-of-the-art DNA synthesis and assembly technologies to the … methods for efficient QA/QC based on next-generation sequencing technologies including PacBio and Illumina.  The …
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In vitro Characterization of Phenylacetate Decarboxylase, a Novel Enzyme Catalyzing Toluene Biosynthesis in an Anaerobic Microbial Community
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Metabolomics Program
… The JGI’s Metabolomics Program works to uncover the roles of small molecules in biological systems, linking them with genomic data to enhance our understanding of genome science, organisms, and … Program is focused on understanding the critical roles of metabolites in living systems, particularly as they …
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CSP Large Scale Call
… science projects that address biological functions for biomanufacturing, critical minerals and materials, … and predictive biology, modeling and biodesign — questions of relevance to DOE’s Biological and Environmental Research … and track record of the applicant. For accepted proposals, sequencing, synthesis, metabolomics and analysis will be …
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Game On: High School Students Drive Everglades Metagenomics Study
… class decided to do an environmental microbial community (metagenomic) soil study in an untouched region of the … DNeasy PowerSoil Kits and sent the samples to the JGI for sequencing.  While JGI processed, sequenced, and analyzed … and organic carbon concentration. From Field Studies to Publication Together as a class, the students learned about …
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